Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LMX1BO60663 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMX1BO60663 AL136116.1-201ENST00000403591 381 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AL591416.1-201ENST00000404015 867 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 RNU6-1148P-201ENST00000410992 104 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 RPS7P15-201ENST00000415804 584 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.16□□□□□ -1.9
LMX1BO60663 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.16□□□□□ -1.9
LMX1BO60663 PPIAP3-201ENST00000450588 505 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.16□□□□□ -1.9
LMX1BO60663 ELOCP23-201ENST00000452014 332 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.16□□□□□ -1.9
LMX1BO60663 AL356010.1-201ENST00000456364 102 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.16□□□□□ -1.9
LMX1BO60663 RPS20P24-201ENST00000457473 361 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 MTND3P22-201ENST00000510932 243 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.16□□□□□ -1.9
LMX1BO60663 NDUFB9P3-201ENST00000521269 501 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AC007991.1-201ENST00000522680 631 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.16□□□□□ -1.9
LMX1BO60663 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.16□□□□□ -1.9
LMX1BO60663 SUB1P1-201ENST00000524415 382 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.16□□□□□ -1.9
LMX1BO60663 AC103843.2-201ENST00000530523 682 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.16□□□□□ -1.9
LMX1BO60663 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.16□□□□□ -1.9
LMX1BO60663 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.16□□□□□ -1.9
LMX1BO60663 AC018638.8-201ENST00000588755 281 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.16□□□□□ -1.9
LMX1BO60663 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.16□□□□□ -1.9
LMX1BO60663 AP001429.1-201ENST00000602568 530 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AL121992.2-201ENST00000606262 256 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AL121757.2-201ENST00000611223 313 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AL442067.2-201ENST00000614033 363 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 AC093648.1-201ENST00000623546 606 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.16□□□□□ -1.9
LMX1BO60663 AC112487.2-201ENST00000637950 304 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
LMX1BO60663 CEP170P1-201ENST00000502249 4587 ntBASIC3.16□□□□□ -1.9
LMX1BO60663 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMX1BO60663 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.16□□□□□ -1.9
LMX1BO60663 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LMX1BO60663 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMX1BO60663 RNVU1-3-201ENST00000364313 161 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 U3.15-201ENST00000365398 212 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 RNA5SP235-201ENST00000365411 114 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMX1BO60663 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AL138878.1-201ENST00000405131 347 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 RNA5SP56-201ENST00000410277 118 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 RNA5SP118-201ENST00000410385 109 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 RNU2-47P-201ENST00000410649 186 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.15□□□□□ -1.91
LMX1BO60663 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.15□□□□□ -1.91
LMX1BO60663 MTND1P14-201ENST00000427400 950 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AP000907.1-201ENST00000428428 510 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC008065.1-201ENST00000428525 348 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 RPS20P5-201ENST00000434808 360 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC093156.1-201ENST00000440382 670 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.15□□□□□ -1.91
LMX1BO60663 BNIP3P2-201ENST00000441221 577 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 RPS3AP46-201ENST00000448352 682 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.15□□□□□ -1.91
LMX1BO60663 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.15□□□□□ -1.91
LMX1BO60663 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.15□□□□□ -1.91
LMX1BO60663 TMEM248P1-201ENST00000510579 951 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC010486.1-201ENST00000511793 424 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.15□□□□□ -1.91
LMX1BO60663 PSMA2P1-201ENST00000526365 646 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LMX1BO60663 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.15□□□□□ -1.91
LMX1BO60663 OR5BN1P-201ENST00000532955 829 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.15□□□□□ -1.91
LMX1BO60663 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.15□□□□□ -1.91
LMX1BO60663 ANP32BP3-201ENST00000559213 706 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 RPS3AP23-202ENST00000574601 686 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 MIR3922-201ENST00000585192 84 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC007038.2-201ENST00000608095 740 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.15□□□□□ -1.91
LMX1BO60663 AC006329.2-201ENST00000611491 394 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 DISC2.1-201ENST00000612827 205 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.15□□□□□ -1.91
LMX1BO60663 C2orf27A-204ENST00000623058 969 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AP000553.6-201ENST00000641242 118 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 AL732372.2-225ENST00000642124 456 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.15□□□□□ -1.91
LMX1BO60663 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMX1BO60663 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.15□□□□□ -1.91
LMX1BO60663 AC066616.2-201ENST00000559334 1481 ntBASIC3.15□□□□□ -1.91
LMX1BO60663 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LMX1BO60663 EXOC5P1-201ENST00000510543 1969 ntBASIC3.14□□□□□ -1.91
LMX1BO60663 PABPC1P7-201ENST00000413177 1513 ntBASIC3.14□□□□□ -1.91
LMX1BO60663 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.14□□□□□ -1.91
LMX1BO60663 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LMX1BO60663 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LMX1BO60663 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LMX1BO60663 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LMX1BO60663 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LMX1BO60663 RNU6-845P-201ENST00000362578 103 ntBASIC3.14□□□□□ -1.91
LMX1BO60663 RNU6-223P-201ENST00000362830 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms