Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 NDUFS5P1-201ENST00000405668 289 ntBASIC2.96□□□□□ -1.94
SNX3O60493 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX3O60493 RNU6-1077P-201ENST00000410506 102 ntBASIC2.96□□□□□ -1.94
SNX3O60493 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.96□□□□□ -1.94
SNX3O60493 AL365338.1-201ENST00000422282 858 ntBASIC2.96□□□□□ -1.94
SNX3O60493 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX3O60493 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 AC009961.2-201ENST00000435771 251 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC104850.1-201ENST00000435940 476 ntBASIC2.96□□□□□ -1.94
SNX3O60493 HIGD1AP11-201ENST00000438361 280 ntBASIC2.96□□□□□ -1.94
SNX3O60493 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 HMGN2P13-201ENST00000476476 274 ntBASIC2.96□□□□□ -1.94
SNX3O60493 RPS27AP9-201ENST00000477681 438 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX3O60493 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX3O60493 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 AC022447.1-201ENST00000515358 464 ntBASIC2.96□□□□□ -1.94
SNX3O60493 RN7SKP258-201ENST00000517151 304 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX3O60493 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX3O60493 AC006362.1-201ENST00000567392 174 ntBASIC2.96□□□□□ -1.94
SNX3O60493 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX3O60493 NBR2-204ENST00000587322 63 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC040904.1-201ENST00000590850 223 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC004832.5-201ENST00000608677 401 ntBASIC2.96□□□□□ -1.94
SNX3O60493 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX3O60493 AC090115.4-201ENST00000609970 188 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC009090.3-201ENST00000616553 565 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC010338.1-201ENST00000621823 717 ntBASIC2.96□□□□□ -1.94
SNX3O60493 AC006111.3-201ENST00000622137 383 ntBASIC2.96□□□□□ -1.94
SNX3O60493 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX3O60493 AC110994.2-201ENST00000635481 492 ntBASIC2.96□□□□□ -1.94
SNX3O60493 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX3O60493 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SNX3O60493 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.95□□□□□ -1.94
SNX3O60493 TPTE2P4-201ENST00000258589 1605 ntBASIC2.95□□□□□ -1.94
SNX3O60493 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNX3O60493 Y_RNA.51-201ENST00000362725 102 ntBASIC2.95□□□□□ -1.94
SNX3O60493 RNU1-35P-201ENST00000362782 153 ntBASIC2.95□□□□□ -1.94
SNX3O60493 Y_RNA.201-201ENST00000364052 96 ntBASIC2.95□□□□□ -1.94
SNX3O60493 RNU4-40P-201ENST00000364351 143 ntBASIC2.95□□□□□ -1.94
SNX3O60493 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX3O60493 RNU6-741P-201ENST00000383889 107 ntBASIC2.95□□□□□ -1.94
SNX3O60493 RNU6-701P-201ENST00000384059 107 ntBASIC2.95□□□□□ -1.94
SNX3O60493 SNORA75-201ENST00000384158 137 ntBASIC2.95□□□□□ -1.94
SNX3O60493 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AL139397.2-201ENST00000404529 772 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX3O60493 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX3O60493 MTCO2P34-201ENST00000421994 607 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.95□□□□□ -1.94
SNX3O60493 AC010153.1-201ENST00000432862 727 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AL512844.2-201ENST00000433990 593 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC073063.1-201ENST00000434352 607 ntBASIC2.95□□□□□ -1.94
SNX3O60493 RPL36AP6-201ENST00000435770 321 ntBASIC2.95□□□□□ -1.94
SNX3O60493 PIGFP3-201ENST00000441918 722 ntBASIC2.95□□□□□ -1.94
SNX3O60493 USP9YP15-201ENST00000442391 422 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.95□□□□□ -1.94
SNX3O60493 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.95□□□□□ -1.94
SNX3O60493 RPS20P22-201ENST00000473700 357 ntBASIC2.95□□□□□ -1.94
SNX3O60493 KC877373.1-201ENST00000479066 408 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX3O60493 ARL2BPP4-201ENST00000506854 471 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC105313.1-201ENST00000509121 353 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX3O60493 SNORA18.6-201ENST00000516792 115 ntBASIC2.95□□□□□ -1.94
SNX3O60493 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX3O60493 ELOCP31-201ENST00000540463 467 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX3O60493 AC107016.2-201ENST00000547968 190 ntBASIC2.95□□□□□ -1.94
SNX3O60493 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX3O60493 TRAV28-201ENST00000557548 323 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX3O60493 DUXAP4-201ENST00000603046 613 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC067959.1-201ENST00000604334 379 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC090578.1-201ENST00000604955 591 ntBASIC2.95□□□□□ -1.94
SNX3O60493 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.95□□□□□ -1.94
SNX3O60493 AC010678.1-201ENST00000614118 713 ntBASIC2.95□□□□□ -1.94
SNX3O60493 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.95□□□□□ -1.94
SNX3O60493 PISRT1-201ENST00000626175 531 ntBASIC2.95□□□□□ -1.94
SNX3O60493 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX3O60493 MTND1P37-201ENST00000636562 264 ntBASIC2.95□□□□□ -1.94
SNX3O60493 Z83843.1-201ENST00000604070 3685 ntBASIC2.95□□□□□ -1.94
SNX3O60493 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX3O60493 AL049641.1-201ENST00000441055 1948 ntBASIC2.95□□□□□ -1.94
SNX3O60493 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
SNX3O60493 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNX3O60493 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.94□□□□□ -1.94
SNX3O60493 OR5J1P-201ENST00000313544 939 ntBASIC2.94□□□□□ -1.94
SNX3O60493 RN7SKP227-201ENST00000364445 330 ntBASIC2.94□□□□□ -1.94
SNX3O60493 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNX3O60493 RNU6-348P-201ENST00000384386 107 ntBASIC2.94□□□□□ -1.94
SNX3O60493 RNU2-8P-201ENST00000410727 190 ntBASIC2.94□□□□□ -1.94
SNX3O60493 RAB28P1-201ENST00000411517 641 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms