Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 USP9YP23-201ENST00000455085 407 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 RPL23AP55-201ENST00000498163 452 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 RPL39P5-202ENST00000512505 151 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 RNU6-566P-201ENST00000516790 107 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 Y_RNA.711-201ENST00000516993 102 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 RNU6-794P-201ENST00000517261 64 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.07□□□□□ -1.6
GRIN3BO60391 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.07□□□□□ -1.6
GRIN3BO60391 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GRIN3BO60391 MIR4472-2-201ENST00000582069 67 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 AC080078.3-201ENST00000605407 463 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.07□□□□□ -1.6
GRIN3BO60391 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
GRIN3BO60391 AC103705.1-201ENST00000619013 241 ntBASIC5.07□□□□□ -1.6
GRIN3BO60391 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
GRIN3BO60391 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.07□□□□□ -1.6
GRIN3BO60391 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
GRIN3BO60391 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GRIN3BO60391 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.06□□□□□ -1.6
GRIN3BO60391 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 XIAPP3-201ENST00000312918 795 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 SNORA60-201ENST00000362396 134 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 SNORA70E-201ENST00000384492 135 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.06□□□□□ -1.6
GRIN3BO60391 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.06□□□□□ -1.6
GRIN3BO60391 AL035423.1-201ENST00000420331 213 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.06□□□□□ -1.6
GRIN3BO60391 MRPS18BP2-201ENST00000434310 759 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.06□□□□□ -1.6
GRIN3BO60391 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.06□□□□□ -1.6
GRIN3BO60391 AC104164.2-201ENST00000496953 495 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 UBE2CP3-201ENST00000502715 450 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AC021146.2-201ENST00000504736 556 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GRIN3BO60391 HMGB1P19-201ENST00000517578 577 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 RANP3-201ENST00000530970 276 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AP000763.2-201ENST00000540641 163 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AL121576.1-201ENST00000556055 276 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GRIN3BO60391 AC008521.1-201ENST00000587471 187 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.06□□□□□ -1.6
GRIN3BO60391 AC092747.3-201ENST00000603769 301 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AC140113.4-201ENST00000622087 222 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 AL359757.2-201ENST00000624309 274 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 AC008013.2-202ENST00000637965 364 ntBASIC5.06□□□□□ -1.6
GRIN3BO60391 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
GRIN3BO60391 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GRIN3BO60391 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
GRIN3BO60391 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GRIN3BO60391 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GRIN3BO60391 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GRIN3BO60391 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
GRIN3BO60391 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.05□□□□□ -1.6
GRIN3BO60391 AC011155.1-201ENST00000316512 456 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 Y_RNA.133-201ENST00000363428 110 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 SMIM11P1-201ENST00000369586 178 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 MIR128-1-201ENST00000384921 82 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AL603908.1-201ENST00000406098 201 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 MIR1289-1-201ENST00000408836 144 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RPL37P10-201ENST00000412884 288 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RPL30P2-201ENST00000414021 291 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AL137014.1-201ENST00000420490 1226 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AL139396.1-201ENST00000421137 167 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.05□□□□□ -1.6
GRIN3BO60391 Z82205.1-201ENST00000428456 297 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RPL23AP25-201ENST00000430973 463 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 GAPDHP27-201ENST00000447427 1020 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.05□□□□□ -1.6
GRIN3BO60391 RN7SL601P-201ENST00000471221 293 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RN7SL429P-201ENST00000479090 223 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RPS29P19-201ENST00000479709 171 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RN7SL489P-201ENST00000486185 223 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RN7SL327P-201ENST00000488659 223 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GRIN3BO60391 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.05□□□□□ -1.6
GRIN3BO60391 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.05□□□□□ -1.6
GRIN3BO60391 RNU6-256P-201ENST00000516747 97 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 RNA5SP454-201ENST00000517231 127 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.05□□□□□ -1.6
GRIN3BO60391 IMMP1LP2-201ENST00000552954 492 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AC006270.2-201ENST00000578523 652 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AC091178.1-203ENST00000584586 279 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.05□□□□□ -1.6
GRIN3BO60391 MIR3922-201ENST00000585192 84 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.05□□□□□ -1.6
GRIN3BO60391 RN7SL853P-201ENST00000617250 223 ntBASIC5.05□□□□□ -1.6
GRIN3BO60391 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.05□□□□□ -1.6
GRIN3BO60391 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.05□□□□□ -1.6
GRIN3BO60391 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
GRIN3BO60391 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GRIN3BO60391 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GRIN3BO60391 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
GRIN3BO60391 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms