Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 GPR143P-201ENST00000434155 205 ntBASIC3.12□□□□□ -1.91
PRKNO60260 ELOCP7-201ENST00000439968 331 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC005094.1-201ENST00000440420 368 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.12□□□□□ -1.91
PRKNO60260 AL662791.1-201ENST00000441992 928 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.12□□□□□ -1.91
PRKNO60260 AL121871.1-201ENST00000443413 436 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.12□□□□□ -1.91
PRKNO60260 AC140076.1-201ENST00000449897 361 ntBASIC3.12□□□□□ -1.91
PRKNO60260 RNU7-170P-201ENST00000459303 61 ntBASIC3.12□□□□□ -1.91
PRKNO60260 MTCO3P38-201ENST00000468910 766 ntBASIC3.12□□□□□ -1.91
PRKNO60260 RPL7P47-201ENST00000497299 556 ntBASIC3.12□□□□□ -1.91
PRKNO60260 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRKNO60260 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.12□□□□□ -1.91
PRKNO60260 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.12□□□□□ -1.91
PRKNO60260 AC011979.2-201ENST00000527568 352 ntBASIC3.12□□□□□ -1.91
PRKNO60260 MTCYBP41-201ENST00000528913 1123 ntBASIC3.12□□□□□ -1.91
PRKNO60260 HMGB1P33-201ENST00000563485 527 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC234778.2-201ENST00000566241 354 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC098848.2-201ENST00000588023 330 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.12□□□□□ -1.91
PRKNO60260 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.12□□□□□ -1.91
PRKNO60260 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC009161.2-201ENST00000624626 138 ntBASIC3.12□□□□□ -1.91
PRKNO60260 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.12□□□□□ -1.91
PRKNO60260 AP001148.1-201ENST00000624124 2359 ntBASIC3.12□□□□□ -1.91
PRKNO60260 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.12□□□□□ -1.91
PRKNO60260 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PRKNO60260 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRKNO60260 CR848007.1-201ENST00000442354 1699 ntBASIC3.11□□□□□ -1.91
PRKNO60260 DDX10P1-201ENST00000448545 1933 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AF127577.6-201ENST00000623352 2191 ntBASIC3.11□□□□□ -1.91
PRKNO60260 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKNO60260 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PRKNO60260 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PRKNO60260 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PRKNO60260 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PRKNO60260 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 RNU6-1090P-201ENST00000364065 94 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.11□□□□□ -1.91
PRKNO60260 MIR1-2-201ENST00000384961 85 ntBASIC3.11□□□□□ -1.91
PRKNO60260 RNU2-9P-201ENST00000410194 145 ntBASIC3.11□□□□□ -1.91
PRKNO60260 RNU2-36P-201ENST00000410361 191 ntBASIC3.11□□□□□ -1.91
PRKNO60260 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.11□□□□□ -1.91
PRKNO60260 AL158156.1-201ENST00000422509 473 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 RPL21P112-201ENST00000434403 463 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AC090774.1-201ENST00000435925 246 ntBASIC3.11□□□□□ -1.91
PRKNO60260 RPS15AP9-201ENST00000439856 381 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.11□□□□□ -1.91
PRKNO60260 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 AL162389.1-201ENST00000449233 177 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKNO60260 BX510359.1-201ENST00000456973 237 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AC010285.1-201ENST00000470580 392 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKNO60260 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.11□□□□□ -1.91
PRKNO60260 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKNO60260 FAM60DP-201ENST00000524174 632 ntBASIC3.11□□□□□ -1.91
PRKNO60260 OR5AQ1P-201ENST00000527596 927 ntBASIC3.11□□□□□ -1.91
PRKNO60260 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRKNO60260 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKNO60260 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKNO60260 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKNO60260 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKNO60260 AC123904.3-201ENST00000547218 814 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.11□□□□□ -1.91
PRKNO60260 AC128657.1-201ENST00000549459 145 ntBASIC3.11□□□□□ -1.91
PRKNO60260 ARL2BPP2-201ENST00000550907 489 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AL512360.1-201ENST00000555346 234 ntBASIC3.11□□□□□ -1.91
PRKNO60260 RPL21P12-201ENST00000559810 515 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.11□□□□□ -1.91
PRKNO60260 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.11□□□□□ -1.91
PRKNO60260 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.11□□□□□ -1.91
PRKNO60260 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.11□□□□□ -1.91
PRKNO60260 SNORD84-203ENST00000584275 78 ntBASIC3.11□□□□□ -1.91
PRKNO60260 MIR4293-201ENST00000584305 78 ntBASIC3.11□□□□□ -1.91
PRKNO60260 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
PRKNO60260 GLUD1P4-201ENST00000590914 418 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.11□□□□□ -1.91
PRKNO60260 AC025449.1-201ENST00000603896 529 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AP001596.2-201ENST00000608410 312 ntBASIC3.11□□□□□ -1.91
PRKNO60260 TUG1_2.1-201ENST00000614234 87 ntBASIC3.11□□□□□ -1.91
PRKNO60260 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.11□□□□□ -1.91
PRKNO60260 AL603758.1-201ENST00000618654 241 ntBASIC3.11□□□□□ -1.91
PRKNO60260 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.11□□□□□ -1.91
PRKNO60260 MIR3688-2-201ENST00000636963 87 ntBASIC3.11□□□□□ -1.91
PRKNO60260 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PRKNO60260 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.11□□□□□ -1.91
PRKNO60260 AC138915.3-201ENST00000562908 1389 ntBASIC3.11□□□□□ -1.91
PRKNO60260 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKNO60260 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRKNO60260 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKNO60260 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PRKNO60260 RNU1-70P-201ENST00000362618 164 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms