Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TPTE2P4-201ENST00000258589 1605 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 RNA5SP447-201ENST00000363749 119 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 Y_RNA.222-201ENST00000364264 102 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 RNU6-128P-201ENST00000383976 107 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 RNU6-746P-201ENST00000384112 109 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 Y_RNA.483-201ENST00000384380 101 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 Y_RNA.576-201ENST00000384781 102 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 MIR3065-201ENST00000390137 79 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 AL583834.1-201ENST00000406943 343 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 RNU2-38P-201ENST00000410856 79 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 RPS15AP40-201ENST00000419621 391 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 PIGPP3-201ENST00000425307 415 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 USMG5P1-201ENST00000425964 177 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 MTND5P15-201ENST00000434246 349 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 AL353752.1-201ENST00000454946 260 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 SNORD5.1-201ENST00000458800 75 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 AP001992.1-205ENST00000462248 379 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC087385.1-201ENST00000475062 312 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 FO393415.2-201ENST00000480085 343 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 RNU6-120P-201ENST00000516077 103 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 IGHV3-76-201ENST00000522465 295 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC023575.1-201ENST00000580510 358 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 FTX_2.1-201ENST00000618816 94 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC140113.4-201ENST00000622087 222 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 AC103710.2-202ENST00000641454 2853 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 NOL8P1-201ENST00000508336 3529 ntBASIC4.29□□□□□ -1.72
PRICKLE3O43900 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRICKLE3O43900 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PRICKLE3O43900 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRICKLE3O43900 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRICKLE3O43900 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 Y_RNA.39-201ENST00000362620 98 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 RNU6-770P-201ENST00000363929 105 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AL359837.1-201ENST00000381357 287 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 Y_RNA.478-201ENST00000384358 107 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 SNORA24.1-201ENST00000384401 135 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 MIR134-201ENST00000385258 73 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 RNA5SP219-201ENST00000390940 113 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 AL137014.1-201ENST00000420490 1226 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC099799.1-201ENST00000439809 192 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 RPS15AP27-201ENST00000449183 343 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 MTND4LP30-201ENST00000454092 297 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC005008.1-201ENST00000456151 612 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 SCARNA18-201ENST00000459004 134 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 RPL37P6-202ENST00000464216 403 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 RPL39P38-201ENST00000467018 153 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 MED28P2-201ENST00000475771 317 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 NIP7P2-201ENST00000485801 544 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 DEFB109F-201ENST00000491870 277 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC009901.1-201ENST00000506703 541 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC093853.1-201ENST00000515689 483 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 SCARNA16.2-201ENST00000516520 172 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 Y_RNA.715-201ENST00000517082 110 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC090115.3-201ENST00000553218 849 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 MIR5692C1-201ENST00000585309 91 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC006254.3-201ENST00000603353 884 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AL713866.2-201ENST00000603579 219 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC079587.1-201ENST00000603846 277 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 SNORD91B-202ENST00000608459 222 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 AC103858.2-201ENST00000621471 543 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 BMS1P21-201ENST00000634565 365 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 MIR6715B-201ENST00000637172 77 ntBASIC4.28□□□□□ -1.72
PRICKLE3O43900 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRICKLE3O43900 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
PRICKLE3O43900 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.28□□□□□ -1.73
PRICKLE3O43900 AL122126.1-201ENST00000546905 1318 ntBASIC4.27□□□□□ -1.73
PRICKLE3O43900 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRICKLE3O43900 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRICKLE3O43900 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRICKLE3O43900 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms