Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 AC117522.3-201ENST00000507974 584 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.91□□□□□ -1.78
PROM1O43490 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.91□□□□□ -1.78
PROM1O43490 Y_RNA.665-201ENST00000516177 98 ntBASIC3.91□□□□□ -1.78
PROM1O43490 MIR2114-201ENST00000516645 80 ntBASIC3.91□□□□□ -1.78
PROM1O43490 SNORA67.7-201ENST00000516664 135 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC023632.4-201ENST00000517783 191 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AP004371.1-201ENST00000525240 214 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.91□□□□□ -1.78
PROM1O43490 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.91□□□□□ -1.78
PROM1O43490 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.91□□□□□ -1.78
PROM1O43490 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.91□□□□□ -1.78
PROM1O43490 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.91□□□□□ -1.78
PROM1O43490 AL133255.1-201ENST00000606374 441 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC012603.1-201ENST00000606424 528 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC006133.1-201ENST00000617106 264 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC025034.2-201ENST00000623264 286 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
PROM1O43490 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.91□□□□□ -1.78
PROM1O43490 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PROM1O43490 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.91□□□□□ -1.78
PROM1O43490 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PROM1O43490 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.9□□□□□ -1.78
PROM1O43490 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.78
PROM1O43490 Y_RNA.100-201ENST00000363141 102 ntBASIC3.9□□□□□ -1.79
PROM1O43490 RNU5E-6P-201ENST00000365574 115 ntBASIC3.9□□□□□ -1.79
PROM1O43490 Y_RNA.394-201ENST00000383942 103 ntBASIC3.9□□□□□ -1.79
PROM1O43490 RNU1-89P-201ENST00000384592 164 ntBASIC3.9□□□□□ -1.79
PROM1O43490 MIR670-201ENST00000390142 98 ntBASIC3.9□□□□□ -1.79
PROM1O43490 AL590004.1-201ENST00000405321 300 ntBASIC3.9□□□□□ -1.79
PROM1O43490 RPL21P24-201ENST00000413752 448 ntBASIC3.9□□□□□ -1.79
PROM1O43490 AC114491.1-201ENST00000416095 246 ntBASIC3.9□□□□□ -1.79
PROM1O43490 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.9□□□□□ -1.79
PROM1O43490 AC005534.2-201ENST00000431047 433 ntBASIC3.9□□□□□ -1.79
PROM1O43490 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.9□□□□□ -1.79
PROM1O43490 AL118520.1-201ENST00000450770 291 ntBASIC3.9□□□□□ -1.79
PROM1O43490 SNORD97-201ENST00000459187 142 ntBASIC3.9□□□□□ -1.79
PROM1O43490 RPL21P104-201ENST00000464143 478 ntBASIC3.9□□□□□ -1.79
PROM1O43490 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
PROM1O43490 RNU6-1038P-201ENST00000516516 104 ntBASIC3.9□□□□□ -1.79
PROM1O43490 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.9□□□□□ -1.79
PROM1O43490 AC103783.1-201ENST00000520506 373 ntBASIC3.9□□□□□ -1.79
PROM1O43490 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.9□□□□□ -1.79
PROM1O43490 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.9□□□□□ -1.79
PROM1O43490 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.9□□□□□ -1.79
PROM1O43490 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.9□□□□□ -1.79
PROM1O43490 RN7SL600P-201ENST00000581811 299 ntBASIC3.9□□□□□ -1.79
PROM1O43490 MIR3158-1-201ENST00000583596 81 ntBASIC3.9□□□□□ -1.79
PROM1O43490 MIR4293-201ENST00000584305 78 ntBASIC3.9□□□□□ -1.79
PROM1O43490 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.9□□□□□ -1.79
PROM1O43490 PART1_1.1-201ENST00000611761 217 ntBASIC3.9□□□□□ -1.79
PROM1O43490 AC093838.1-201ENST00000613014 469 ntBASIC3.9□□□□□ -1.79
PROM1O43490 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PROM1O43490 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PROM1O43490 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PROM1O43490 AP001350.1-201ENST00000601906 1524 ntBASIC3.9□□□□□ -1.79
PROM1O43490 AC116667.1-201ENST00000604855 2072 ntBASIC3.9□□□□□ -1.79
PROM1O43490 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PROM1O43490 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
PROM1O43490 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.89□□□□□ -1.79
PROM1O43490 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PROM1O43490 SPRR2C-201ENST00000290702 219 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RNU6-1287P-201ENST00000362914 107 ntBASIC3.89□□□□□ -1.79
PROM1O43490 SNORD6-201ENST00000365444 73 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RNU6-1227P-201ENST00000383981 107 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RNU6-1181P-201ENST00000384191 106 ntBASIC3.89□□□□□ -1.79
PROM1O43490 SNORA24.1-201ENST00000384401 135 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RNU6-831P-201ENST00000384548 107 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RNU6-1060P-201ENST00000384664 107 ntBASIC3.89□□□□□ -1.79
PROM1O43490 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PROM1O43490 UBE2V1P2-201ENST00000397758 440 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RN7SKP202-201ENST00000410439 330 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RNU4-65P-201ENST00000410473 140 ntBASIC3.89□□□□□ -1.79
PROM1O43490 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 HSPE1P1-201ENST00000421494 318 ntBASIC3.89□□□□□ -1.79
PROM1O43490 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.89□□□□□ -1.79
PROM1O43490 AC024082.2-201ENST00000434771 238 ntBASIC3.89□□□□□ -1.79
PROM1O43490 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.89□□□□□ -1.79
PROM1O43490 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 AC091885.1-201ENST00000506658 268 ntBASIC3.89□□□□□ -1.79
PROM1O43490 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 AC026801.2-201ENST00000515352 425 ntBASIC3.89□□□□□ -1.79
PROM1O43490 RNU6-1092P-201ENST00000516955 87 ntBASIC3.89□□□□□ -1.79
PROM1O43490 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.89□□□□□ -1.79
PROM1O43490 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.89□□□□□ -1.79
PROM1O43490 RPL23AP87-202ENST00000573039 466 ntBASIC3.89□□□□□ -1.79
PROM1O43490 MIR3690-201ENST00000580266 75 ntBASIC3.89□□□□□ -1.79
PROM1O43490 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms