Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.62□□□□□ -1.83
MSI1O43347 AC004866.2-201ENST00000438285 481 ntBASIC3.62□□□□□ -1.83
MSI1O43347 RPL7P54-201ENST00000438336 674 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 AC079781.2-201ENST00000446424 169 ntBASIC3.62□□□□□ -1.83
MSI1O43347 GAPDHP27-201ENST00000447427 1020 ntBASIC3.62□□□□□ -1.83
MSI1O43347 PRDX3P3-201ENST00000447765 522 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC140076.1-201ENST00000449897 361 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.62□□□□□ -1.83
MSI1O43347 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.62□□□□□ -1.83
MSI1O43347 HSPD1P15-201ENST00000505573 1122 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.62□□□□□ -1.83
MSI1O43347 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.62□□□□□ -1.83
MSI1O43347 SNORA31.20-201ENST00000517111 133 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AP006245.1-201ENST00000522549 120 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 AC128657.1-201ENST00000549459 145 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.62□□□□□ -1.83
MSI1O43347 MIR5047-201ENST00000579212 100 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC067852.3-201ENST00000589177 561 ntBASIC3.62□□□□□ -1.83
MSI1O43347 SNRPGP15-201ENST00000600149 222 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AL603758.1-201ENST00000618654 241 ntBASIC3.62□□□□□ -1.83
MSI1O43347 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MSI1O43347 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MSI1O43347 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MSI1O43347 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MSI1O43347 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
MSI1O43347 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MSI1O43347 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
MSI1O43347 ZNF680P1-201ENST00000436625 1469 ntBASIC3.61□□□□□ -1.83
MSI1O43347 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.61□□□□□ -1.83
MSI1O43347 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MSI1O43347 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
MSI1O43347 Y_RNA.89-201ENST00000363031 102 ntBASIC3.61□□□□□ -1.83
MSI1O43347 RNA5SP50-201ENST00000363731 107 ntBASIC3.61□□□□□ -1.83
MSI1O43347 RNU6-1074P-201ENST00000383995 104 ntBASIC3.61□□□□□ -1.83
MSI1O43347 RNU6-1158P-201ENST00000391167 107 ntBASIC3.61□□□□□ -1.83
MSI1O43347 RN7SKP285-201ENST00000410137 318 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.61□□□□□ -1.83
MSI1O43347 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.61□□□□□ -1.83
MSI1O43347 BX323014.1-201ENST00000412876 237 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.61□□□□□ -1.83
MSI1O43347 RPL21P24-201ENST00000413752 448 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.61□□□□□ -1.83
MSI1O43347 PPP1R11P2-201ENST00000423543 382 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.61□□□□□ -1.83
MSI1O43347 OR2AS1P-201ENST00000427827 319 ntBASIC3.61□□□□□ -1.83
MSI1O43347 HMGB1P31-201ENST00000437242 427 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AL353572.1-201ENST00000442490 417 ntBASIC3.61□□□□□ -1.83
MSI1O43347 RPS29P31-201ENST00000446147 164 ntBASIC3.61□□□□□ -1.83
MSI1O43347 WASF1P1-201ENST00000447560 1131 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.61□□□□□ -1.83
MSI1O43347 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.61□□□□□ -1.83
MSI1O43347 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.61□□□□□ -1.83
MSI1O43347 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.61□□□□□ -1.83
MSI1O43347 SNORD27.1-201ENST00000516319 72 ntBASIC3.61□□□□□ -1.83
MSI1O43347 HMGB1P41-201ENST00000520234 440 ntBASIC3.61□□□□□ -1.83
MSI1O43347 FAM60DP-201ENST00000524174 632 ntBASIC3.61□□□□□ -1.83
MSI1O43347 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.61□□□□□ -1.83
MSI1O43347 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.61□□□□□ -1.83
MSI1O43347 AP005205.1-201ENST00000563503 508 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AL022099.1-201ENST00000604551 712 ntBASIC3.61□□□□□ -1.83
MSI1O43347 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MSI1O43347 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.61□□□□□ -1.83
MSI1O43347 AC005609.4-201ENST00000625071 447 ntBASIC3.61□□□□□ -1.83
MSI1O43347 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.61□□□□□ -1.83
MSI1O43347 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.61□□□□□ -1.83
MSI1O43347 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.61□□□□□ -1.83
MSI1O43347 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.61□□□□□ -1.83
MSI1O43347 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.61□□□□□ -1.83
MSI1O43347 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.61□□□□□ -1.83
MSI1O43347 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MSI1O43347 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
MSI1O43347 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
MSI1O43347 AC068647.1-201ENST00000489539 2265 ntBASIC3.6□□□□□ -1.83
MSI1O43347 DDX10P1-201ENST00000448545 1933 ntBASIC3.6□□□□□ -1.83
MSI1O43347 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.6□□□□□ -1.83
MSI1O43347 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.6□□□□□ -1.83
MSI1O43347 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MSI1O43347 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MSI1O43347 Y_RNA.88-201ENST00000363029 99 ntBASIC3.6□□□□□ -1.83
MSI1O43347 RNU6-1322P-201ENST00000364309 107 ntBASIC3.6□□□□□ -1.83
MSI1O43347 Y_RNA.303-201ENST00000364998 94 ntBASIC3.6□□□□□ -1.83
MSI1O43347 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
MSI1O43347 AL136372.1-201ENST00000403060 228 ntBASIC3.6□□□□□ -1.83
MSI1O43347 RNU6-908P-201ENST00000410160 94 ntBASIC3.6□□□□□ -1.83
MSI1O43347 SDCBPP3-201ENST00000419629 891 ntBASIC3.6□□□□□ -1.83
MSI1O43347 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.6□□□□□ -1.83
MSI1O43347 AL606489.2-201ENST00000433886 234 ntBASIC3.6□□□□□ -1.83
MSI1O43347 RPS20P5-201ENST00000434808 360 ntBASIC3.6□□□□□ -1.83
MSI1O43347 USP9YP7-201ENST00000436723 430 ntBASIC3.6□□□□□ -1.83
MSI1O43347 TXNP1-201ENST00000441872 371 ntBASIC3.6□□□□□ -1.83
MSI1O43347 MTCO3P45-201ENST00000443036 613 ntBASIC3.6□□□□□ -1.83
MSI1O43347 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.6□□□□□ -1.83
MSI1O43347 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.6□□□□□ -1.83
MSI1O43347 USP9YP32-201ENST00000452432 430 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms