Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 AC024082.2-201ENST00000434771 238 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.8□□□□□ -1.8
CTIFO43310 HSFY6P-201ENST00000445573 403 ntBASIC3.8□□□□□ -1.8
CTIFO43310 MTND5P20-201ENST00000448677 143 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 SNORD97-201ENST00000459187 142 ntBASIC3.8□□□□□ -1.8
CTIFO43310 CENPBD1P1-201ENST00000464061 469 ntBASIC3.8□□□□□ -1.8
CTIFO43310 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 RPS27AP1-201ENST00000475545 471 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AC078785.3-201ENST00000476607 425 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AC078918.1-201ENST00000498515 228 ntBASIC3.8□□□□□ -1.8
CTIFO43310 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTIFO43310 RNU2-27P-201ENST00000516185 142 ntBASIC3.8□□□□□ -1.8
CTIFO43310 RNU1-143P-201ENST00000516296 146 ntBASIC3.8□□□□□ -1.8
CTIFO43310 Y_RNA.702-201ENST00000516843 96 ntBASIC3.8□□□□□ -1.8
CTIFO43310 SCARNA20.6-201ENST00000517251 106 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.8□□□□□ -1.8
CTIFO43310 OR4R1P-201ENST00000529879 463 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.8□□□□□ -1.8
CTIFO43310 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
CTIFO43310 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 AL512310.1-201ENST00000548639 172 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 AL512360.1-201ENST00000555346 234 ntBASIC3.8□□□□□ -1.8
CTIFO43310 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 AL359212.1-201ENST00000556608 614 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.8□□□□□ -1.8
CTIFO43310 AC008536.2-201ENST00000607284 349 ntBASIC3.8□□□□□ -1.8
CTIFO43310 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.8□□□□□ -1.8
CTIFO43310 U1.23-201ENST00000610293 146 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.8□□□□□ -1.8
CTIFO43310 RNU1-68P-201ENST00000615382 146 ntBASIC3.8□□□□□ -1.8
CTIFO43310 AC104985.2-201ENST00000620598 500 ntBASIC3.8□□□□□ -1.8
CTIFO43310 U1.39-201ENST00000621562 146 ntBASIC3.8□□□□□ -1.8
CTIFO43310 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.8□□□□□ -1.8
CTIFO43310 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.8□□□□□ -1.8
CTIFO43310 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.8□□□□□ -1.8
CTIFO43310 AP001350.1-201ENST00000601906 1524 ntBASIC3.8□□□□□ -1.8
CTIFO43310 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTIFO43310 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTIFO43310 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CTIFO43310 RPL7P26-201ENST00000333817 754 ntBASIC3.79□□□□□ -1.8
CTIFO43310 Y_RNA.89-201ENST00000363031 102 ntBASIC3.79□□□□□ -1.8
CTIFO43310 Y_RNA.295-201ENST00000364918 102 ntBASIC3.79□□□□□ -1.8
CTIFO43310 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTIFO43310 RNU6-76P-201ENST00000384060 104 ntBASIC3.79□□□□□ -1.8
CTIFO43310 MIR558-201ENST00000384920 94 ntBASIC3.79□□□□□ -1.8
CTIFO43310 TXNP7-201ENST00000406296 293 ntBASIC3.79□□□□□ -1.8
CTIFO43310 ZNF863P-201ENST00000426746 417 ntBASIC3.79□□□□□ -1.8
CTIFO43310 OR2AS1P-201ENST00000427827 319 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.79□□□□□ -1.8
CTIFO43310 SNRPGP6-201ENST00000451124 220 ntBASIC3.79□□□□□ -1.8
CTIFO43310 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
CTIFO43310 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.79□□□□□ -1.8
CTIFO43310 AP000873.1-201ENST00000463987 400 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC110792.1-201ENST00000491826 472 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC004062.1-201ENST00000509926 645 ntBASIC3.79□□□□□ -1.8
CTIFO43310 RNU6-507P-201ENST00000516045 100 ntBASIC3.79□□□□□ -1.8
CTIFO43310 Y_RNA.693-201ENST00000516641 110 ntBASIC3.79□□□□□ -1.8
CTIFO43310 SNORA20.3-201ENST00000516880 132 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.79□□□□□ -1.8
CTIFO43310 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.79□□□□□ -1.8
CTIFO43310 HMGB1P41-201ENST00000520234 440 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.79□□□□□ -1.8
CTIFO43310 AP001646.1-201ENST00000527936 915 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC109635.3-201ENST00000529536 185 ntBASIC3.79□□□□□ -1.8
CTIFO43310 ARL2BPP2-201ENST00000550907 489 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AL157687.1-201ENST00000554853 619 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC106785.1-201ENST00000565935 262 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.79□□□□□ -1.8
CTIFO43310 AC025678.1-201ENST00000567861 338 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CTIFO43310 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.79□□□□□ -1.8
CTIFO43310 AC012443.1-201ENST00000605605 231 ntBASIC3.79□□□□□ -1.8
CTIFO43310 MIR8058-201ENST00000615737 89 ntBASIC3.79□□□□□ -1.8
CTIFO43310 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTIFO43310 AC093831.2-201ENST00000624393 3427 ntBASIC3.79□□□□□ -1.8
CTIFO43310 AC005183.1-201ENST00000603687 1979 ntBASIC3.79□□□□□ -1.8
CTIFO43310 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTIFO43310 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTIFO43310 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.78□□□□□ -1.8
CTIFO43310 CASC19-280ENST00000642102 1351 ntBASIC3.78□□□□□ -1.8
CTIFO43310 Y_RNA.38-201ENST00000362617 102 ntBASIC3.78□□□□□ -1.8
CTIFO43310 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTIFO43310 RNU1-39P-201ENST00000383897 165 ntBASIC3.78□□□□□ -1.8
CTIFO43310 RNU6-483P-201ENST00000384088 108 ntBASIC3.78□□□□□ -1.8
CTIFO43310 MIR1-2-201ENST00000384961 85 ntBASIC3.78□□□□□ -1.8
CTIFO43310 MIR134-201ENST00000385258 73 ntBASIC3.78□□□□□ -1.8
CTIFO43310 SNORA11.2-201ENST00000408318 127 ntBASIC3.78□□□□□ -1.8
CTIFO43310 RNU2-36P-201ENST00000410361 191 ntBASIC3.78□□□□□ -1.8
CTIFO43310 USP9YP27-201ENST00000418455 438 ntBASIC3.78□□□□□ -1.8
CTIFO43310 AL353193.1-201ENST00000421444 268 ntBASIC3.78□□□□□ -1.8
CTIFO43310 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.78□□□□□ -1.8
CTIFO43310 DUTP6-201ENST00000425573 462 ntBASIC3.78□□□□□ -1.8
CTIFO43310 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.78□□□□□ -1.8
CTIFO43310 MED13P1-201ENST00000428342 171 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms