Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TPTE2P4-201ENST00000258589 1605 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PHGDHO43175 CISD1P1-201ENST00000393907 327 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.86□□□□□ -1.79
PHGDHO43175 RNU4-46P-201ENST00000410818 138 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 Z85995.1-201ENST00000415547 335 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 BX842559.1-201ENST00000419615 532 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AL691449.1-201ENST00000426570 421 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 C4BPAP2-201ENST00000428434 478 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.86□□□□□ -1.79
PHGDHO43175 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.86□□□□□ -1.79
PHGDHO43175 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.86□□□□□ -1.79
PHGDHO43175 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.86□□□□□ -1.79
PHGDHO43175 RPL9P32-201ENST00000464118 620 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 RPL39P36-201ENST00000490784 156 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PHGDHO43175 RNU4-29P-201ENST00000515943 174 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 SNORA31.9-201ENST00000516429 84 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 MRPL49P2-201ENST00000521066 465 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.86□□□□□ -1.79
PHGDHO43175 ATP5F1P5-201ENST00000526403 760 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AC118273.2-201ENST00000532092 465 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 YPEL5P3-201ENST00000547227 352 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.86□□□□□ -1.79
PHGDHO43175 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
PHGDHO43175 AC060780.3-201ENST00000589464 80 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AC010525.2-201ENST00000590920 195 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AL138889.2-201ENST00000603883 242 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 BRDTP1-201ENST00000605735 677 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 AC107294.1-201ENST00000609524 467 ntBASIC3.86□□□□□ -1.79
PHGDHO43175 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
PHGDHO43175 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PHGDHO43175 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PHGDHO43175 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.85□□□□□ -1.79
PHGDHO43175 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
PHGDHO43175 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 OR4G1P-203ENST00000641984 1631 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 RNU6-1167P-201ENST00000363227 94 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.85□□□□□ -1.79
PHGDHO43175 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
PHGDHO43175 RNU6-741P-201ENST00000383889 107 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RNU6-876P-201ENST00000391295 104 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 HMGN2P8-201ENST00000391458 268 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.85□□□□□ -1.79
PHGDHO43175 FGF7P8-201ENST00000402994 292 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 PPIAP31-201ENST00000405422 495 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 U3.42-201ENST00000408746 214 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RNU6-193P-201ENST00000410977 107 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RHEBP3-201ENST00000411920 351 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 AC009237.5-201ENST00000414271 501 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 AC080125.1-201ENST00000414888 684 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RPL30P16-201ENST00000419341 429 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 AL451062.2-201ENST00000427515 271 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.85□□□□□ -1.79
PHGDHO43175 TAAR7P-201ENST00000436141 242 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RPS23P3-201ENST00000470993 430 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RPL7P5-201ENST00000471472 736 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 PPIAP15-201ENST00000479662 484 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 TRBV12-2-201ENST00000489763 344 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.85□□□□□ -1.79
PHGDHO43175 HMGB3P15-201ENST00000507326 574 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.85□□□□□ -1.79
PHGDHO43175 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 AC074344.1-201ENST00000512823 224 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RNA5SP471-201ENST00000516971 106 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RNA5SP291-201ENST00000517222 105 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.85□□□□□ -1.79
PHGDHO43175 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.85□□□□□ -1.79
PHGDHO43175 AL121576.1-201ENST00000556055 276 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 AC015917.1-201ENST00000579654 510 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 AC093227.2-201ENST00000589357 285 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 AC098826.3-201ENST00000603823 466 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 AC009033.1-201ENST00000624279 431 ntBASIC3.85□□□□□ -1.79
PHGDHO43175 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHGDHO43175 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.85□□□□□ -1.79
PHGDHO43175 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PHGDHO43175 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHGDHO43175 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
PHGDHO43175 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PHGDHO43175 RNU1-18P-201ENST00000363062 164 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 RNU6-512P-201ENST00000364438 103 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 RNU6-867P-201ENST00000364956 107 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms