Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC010149.2-201ENST00000637608 315 ntBASIC2.67□□□□□ -1.98
MSH4O15457 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.67□□□□□ -1.98
MSH4O15457 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MSH4O15457 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.67□□□□□ -1.98
MSH4O15457 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
MSH4O15457 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.67□□□□□ -1.98
MSH4O15457 DDX10P1-201ENST00000448545 1933 ntBASIC2.66□□□□□ -1.98
MSH4O15457 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MSH4O15457 SNORA23-201ENST00000365128 182 ntBASIC2.66□□□□□ -1.98
MSH4O15457 RNU6-83P-201ENST00000384568 112 ntBASIC2.66□□□□□ -1.98
MSH4O15457 U3.20-201ENST00000390909 217 ntBASIC2.66□□□□□ -1.98
MSH4O15457 RN7SKP140-201ENST00000411196 284 ntBASIC2.66□□□□□ -1.98
MSH4O15457 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH4O15457 SPA17P1-201ENST00000416656 452 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.66□□□□□ -1.98
MSH4O15457 AL035407.1-201ENST00000429211 571 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AL512844.2-201ENST00000433990 593 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AL117351.1-201ENST00000438864 766 ntBASIC2.66□□□□□ -1.98
MSH4O15457 RPL7P36-201ENST00000444633 681 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSH4O15457 AP000542.1-201ENST00000448473 371 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.66□□□□□ -1.98
MSH4O15457 RNU6-420P-201ENST00000458780 107 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AC010486.1-201ENST00000511793 424 ntBASIC2.66□□□□□ -1.98
MSH4O15457 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH4O15457 RNU6-311P-201ENST00000516224 102 ntBASIC2.66□□□□□ -1.98
MSH4O15457 RNU6-56P-201ENST00000516986 93 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.66□□□□□ -1.98
MSH4O15457 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.66□□□□□ -1.98
MSH4O15457 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.66□□□□□ -1.98
MSH4O15457 SETP2-201ENST00000553886 926 ntBASIC2.66□□□□□ -1.98
MSH4O15457 HMGB1P14-201ENST00000557424 591 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AC005951.2-201ENST00000576282 495 ntBASIC2.66□□□□□ -1.98
MSH4O15457 BNIP3P40-201ENST00000596017 556 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH4O15457 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.66□□□□□ -1.98
MSH4O15457 AL357094.1-201ENST00000603845 844 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AL450336.1-201ENST00000605180 586 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.66□□□□□ -1.98
MSH4O15457 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
MSH4O15457 AC079597.1-201ENST00000624306 508 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AC019226.1-201ENST00000625666 515 ntBASIC2.66□□□□□ -1.98
MSH4O15457 AC099063.3-201ENST00000642066 185 ntBASIC2.66□□□□□ -1.98
MSH4O15457 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
MSH4O15457 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
MSH4O15457 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.66□□□□□ -1.98
MSH4O15457 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSH4O15457 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.66□□□□□ -1.98
MSH4O15457 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MSH4O15457 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
MSH4O15457 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.65□□□□□ -1.98
MSH4O15457 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.65□□□□□ -1.98
MSH4O15457 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MSH4O15457 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MSH4O15457 SNORD114-30-201ENST00000364448 72 ntBASIC2.65□□□□□ -1.99
MSH4O15457 U8.8-201ENST00000365399 135 ntBASIC2.65□□□□□ -1.99
MSH4O15457 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.65□□□□□ -1.99
MSH4O15457 RNU1-39P-201ENST00000383897 165 ntBASIC2.65□□□□□ -1.99
MSH4O15457 MTCO1P17-201ENST00000411522 491 ntBASIC2.65□□□□□ -1.99
MSH4O15457 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.65□□□□□ -1.99
MSH4O15457 CR769776.1-201ENST00000441254 787 ntBASIC2.65□□□□□ -1.99
MSH4O15457 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
MSH4O15457 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.65□□□□□ -1.99
MSH4O15457 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.65□□□□□ -1.99
MSH4O15457 AL135752.1-201ENST00000479477 471 ntBASIC2.65□□□□□ -1.99
MSH4O15457 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.65□□□□□ -1.99
MSH4O15457 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.65□□□□□ -1.99
MSH4O15457 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
MSH4O15457 AC008413.1-201ENST00000511864 177 ntBASIC2.65□□□□□ -1.99
MSH4O15457 RNU6-826P-201ENST00000516827 104 ntBASIC2.65□□□□□ -1.99
MSH4O15457 HMGN1P28-201ENST00000521340 364 ntBASIC2.65□□□□□ -1.99
MSH4O15457 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.65□□□□□ -1.99
MSH4O15457 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.65□□□□□ -1.99
MSH4O15457 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.65□□□□□ -1.99
MSH4O15457 AL391001.1-201ENST00000602747 715 ntBASIC2.65□□□□□ -1.99
MSH4O15457 AC007938.3-201ENST00000604965 623 ntBASIC2.65□□□□□ -1.99
MSH4O15457 RNU6-88P-201ENST00000606801 100 ntBASIC2.65□□□□□ -1.99
MSH4O15457 AC144521.1-201ENST00000607148 956 ntBASIC2.65□□□□□ -1.99
MSH4O15457 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.65□□□□□ -1.99
MSH4O15457 AP000676.4-201ENST00000624659 623 ntBASIC2.65□□□□□ -1.99
MSH4O15457 AC006927.4-201ENST00000639187 543 ntBASIC2.65□□□□□ -1.99
MSH4O15457 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
MSH4O15457 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MSH4O15457 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.65□□□□□ -1.99
MSH4O15457 AC004944.1-201ENST00000517807 3059 ntBASIC2.65□□□□□ -1.99
MSH4O15457 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MSH4O15457 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.64□□□□□ -1.99
MSH4O15457 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MSH4O15457 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
MSH4O15457 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
MSH4O15457 RNU6-270P-201ENST00000364131 105 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RNU6-157P-201ENST00000383957 107 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RNU6-198P-201ENST00000384258 104 ntBASIC2.64□□□□□ -1.99
MSH4O15457 MIR513B-201ENST00000385136 84 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RNU6-754P-201ENST00000391166 107 ntBASIC2.64□□□□□ -1.99
MSH4O15457 RNU4-53P-201ENST00000410828 140 ntBASIC2.64□□□□□ -1.99
MSH4O15457 PIGPP2-201ENST00000411569 458 ntBASIC2.64□□□□□ -1.99
MSH4O15457 MTND1P21-201ENST00000412991 285 ntBASIC2.64□□□□□ -1.99
MSH4O15457 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.64□□□□□ -1.99
MSH4O15457 AC109583.1-201ENST00000432156 268 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms