Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC007938.3-201ENST00000604965 623 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC068276.1-201ENST00000605793 379 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AP001521.1-201ENST00000609150 300 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC104763.3-201ENST00000613765 618 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AL158801.5-201ENST00000623123 465 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 AC080188.3-201ENST00000624842 748 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 PISRT1-201ENST00000626175 531 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGB3O15347 MTND5P6-201ENST00000422338 1798 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 ZNF702P-202ENST00000434269 1966 ntBASIC1.54□□□□□ -2.16
HMGB3O15347 RNU6-884P-201ENST00000363889 107 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 SNORA48.7-201ENST00000391302 135 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 MTCO2P31-201ENST00000402702 684 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 EIF1AXP1-201ENST00000419267 435 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 BPY2DP-201ENST00000422208 265 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 AL445685.2-201ENST00000422551 342 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.53□□□□□ -2.16
HMGB3O15347 UBE2V2P3-201ENST00000433562 437 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 RPL7P12-201ENST00000446719 750 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 snoU109.1-201ENST00000459339 135 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 RPL21P99-201ENST00000480369 423 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 MTAPP1-201ENST00000489154 819 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.53□□□□□ -2.16
HMGB3O15347 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.53□□□□□ -2.16
HMGB3O15347 AC118282.2-201ENST00000508739 374 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 AF213884.2-201ENST00000510417 903 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGB3O15347 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGB3O15347 AC007151.1-201ENST00000572774 483 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGB3O15347 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HMGB3O15347 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGB3O15347 MIR6873-201ENST00000622788 63 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 AC025034.2-201ENST00000623264 286 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 MTND1P37-201ENST00000636562 264 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 AC132825.7-201ENST00000638744 335 ntBASIC1.53□□□□□ -2.16
HMGB3O15347 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGB3O15347 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
HMGB3O15347 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGB3O15347 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMGB3O15347 RNU1-73P-201ENST00000383971 164 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 SNORD65C-201ENST00000390962 71 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 SNORD56-201ENST00000413522 71 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AC007742.1-201ENST00000425789 329 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGB3O15347 AL512661.1-201ENST00000434586 1253 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 ELOCP26-201ENST00000436067 329 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 ELOCP3-201ENST00000439303 348 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGB3O15347 PPP1R2P5-201ENST00000457256 603 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 RPL23AP41-201ENST00000484754 458 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 HMGB1P36-201ENST00000487709 576 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMGB3O15347 AC097462.2-201ENST00000504623 481 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AC020699.1-201ENST00000505161 445 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AC008526.1-201ENST00000509149 338 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.52□□□□□ -2.17
HMGB3O15347 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGB3O15347 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGB3O15347 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGB3O15347 AC104229.1-201ENST00000561364 255 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AC012435.1-202ENST00000568772 240 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGB3O15347 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGB3O15347 AC105245.1-201ENST00000581934 244 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGB3O15347 AP001269.3-201ENST00000588718 329 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AC106052.1-201ENST00000608029 497 ntBASIC1.52□□□□□ -2.17
HMGB3O15347 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.52□□□□□ -2.17
HMGB3O15347 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMGB3O15347 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HMGB3O15347 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGB3O15347 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HMGB3O15347 AL390862.1-201ENST00000635467 1469 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGB3O15347 SNORD46.1-201ENST00000364139 104 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 RPL23AP29-201ENST00000397284 453 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AL023284.1-201ENST00000403956 276 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 RNU2-33P-201ENST00000410344 192 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 EDDM3CP-201ENST00000415977 425 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AC092634.6-201ENST00000418558 192 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AC244453.4-201ENST00000419150 388 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGB3O15347 AL356320.1-201ENST00000429616 163 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
HMGB3O15347 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AC093155.1-201ENST00000440164 826 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AC098831.1-201ENST00000440661 216 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGB3O15347 RPS3AP14-201ENST00000483907 780 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGB3O15347 OR4G11P-201ENST00000492842 939 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 AC017037.2-201ENST00000513850 890 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 SNORA70.24-201ENST00000517233 118 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 IGKV3-31-201ENST00000523109 329 ntBASIC1.51□□□□□ -2.17
HMGB3O15347 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGB3O15347 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGB3O15347 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms