Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX1O00570 RPL39P38-201ENST00000467018 153 ntBASIC4.98□□□□□ -1.61
SOX1O00570 PPIAP15-201ENST00000479662 484 ntBASIC4.98□□□□□ -1.61
SOX1O00570 AC069499.1-201ENST00000489433 509 ntBASIC4.98□□□□□ -1.61
SOX1O00570 RPS24P16-201ENST00000497294 392 ntBASIC4.98□□□□□ -1.61
SOX1O00570 MTND1P19-201ENST00000511780 315 ntBASIC4.98□□□□□ -1.61
SOX1O00570 SNORA25.11-201ENST00000515935 105 ntBASIC4.98□□□□□ -1.61
SOX1O00570 RNU7-4P-201ENST00000516961 62 ntBASIC4.98□□□□□ -1.61
SOX1O00570 RN7SKP258-201ENST00000517151 304 ntBASIC4.98□□□□□ -1.61
SOX1O00570 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX1O00570 HSPE1P20-201ENST00000538133 289 ntBASIC4.98□□□□□ -1.61
SOX1O00570 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX1O00570 OR4H12P-201ENST00000556269 907 ntBASIC4.98□□□□□ -1.61
SOX1O00570 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX1O00570 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX1O00570 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX1O00570 MIR4512-201ENST00000583257 77 ntBASIC4.98□□□□□ -1.61
SOX1O00570 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX1O00570 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX1O00570 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SOX1O00570 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX1O00570 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX1O00570 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX1O00570 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.98□□□□□ -1.61
SOX1O00570 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SOX1O00570 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SOX1O00570 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.98□□□□□ -1.61
SOX1O00570 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX1O00570 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
SOX1O00570 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 Y_RNA.117-201ENST00000363294 101 ntBASIC4.97□□□□□ -1.61
SOX1O00570 Y_RNA.562-201ENST00000384695 113 ntBASIC4.97□□□□□ -1.61
SOX1O00570 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SOX1O00570 RNU2-38P-201ENST00000410856 79 ntBASIC4.97□□□□□ -1.61
SOX1O00570 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.97□□□□□ -1.61
SOX1O00570 BX842559.1-201ENST00000419615 532 ntBASIC4.97□□□□□ -1.61
SOX1O00570 RPS17P8-201ENST00000434525 335 ntBASIC4.97□□□□□ -1.61
SOX1O00570 DAP3P1-201ENST00000441522 278 ntBASIC4.97□□□□□ -1.61
SOX1O00570 AP000942.1-201ENST00000463969 747 ntBASIC4.97□□□□□ -1.61
SOX1O00570 SNRPCP3-201ENST00000474888 476 ntBASIC4.97□□□□□ -1.61
SOX1O00570 RN7SL441P-201ENST00000492388 296 ntBASIC4.97□□□□□ -1.61
SOX1O00570 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 AC022790.1-201ENST00000522872 204 ntBASIC4.97□□□□□ -1.61
SOX1O00570 AC104576.1-201ENST00000524225 88 ntBASIC4.97□□□□□ -1.61
SOX1O00570 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX1O00570 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.97□□□□□ -1.61
SOX1O00570 MIR4716-201ENST00000579628 84 ntBASIC4.97□□□□□ -1.61
SOX1O00570 MIR4273-201ENST00000582824 84 ntBASIC4.97□□□□□ -1.61
SOX1O00570 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.97□□□□□ -1.61
SOX1O00570 AL139124.1-201ENST00000609123 421 ntBASIC4.97□□□□□ -1.61
SOX1O00570 AC098479.1-201ENST00000609225 154 ntBASIC4.97□□□□□ -1.61
SOX1O00570 MIR6133-201ENST00000617057 108 ntBASIC4.97□□□□□ -1.61
SOX1O00570 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX1O00570 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SOX1O00570 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 ZNF72P-201ENST00000425869 1908 ntBASIC4.97□□□□□ -1.61
SOX1O00570 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SOX1O00570 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.97□□□□□ -1.61
SOX1O00570 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SOX1O00570 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SOX1O00570 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SOX1O00570 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
SOX1O00570 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SOX1O00570 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 Z95331.1-201ENST00000623075 23112 ntBASIC4.96□□□□□ -1.62
SOX1O00570 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX1O00570 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SOX1O00570 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 Y_RNA.60-201ENST00000362831 98 ntBASIC4.96□□□□□ -1.62
SOX1O00570 RNU6-770P-201ENST00000363929 105 ntBASIC4.96□□□□□ -1.62
SOX1O00570 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SOX1O00570 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 BX276092.6-201ENST00000430476 250 ntBASIC4.96□□□□□ -1.62
SOX1O00570 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SOX1O00570 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 AC090774.1-201ENST00000435925 246 ntBASIC4.96□□□□□ -1.62
SOX1O00570 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX1O00570 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.96□□□□□ -1.62
SOX1O00570 H2AFZP5-201ENST00000446960 382 ntBASIC4.96□□□□□ -1.62
SOX1O00570 BX276092.8-201ENST00000455722 250 ntBASIC4.96□□□□□ -1.62
SOX1O00570 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.96□□□□□ -1.62
SOX1O00570 RPL23AP94-201ENST00000512518 302 ntBASIC4.96□□□□□ -1.62
SOX1O00570 SNORA31.3-201ENST00000516029 96 ntBASIC4.96□□□□□ -1.62
SOX1O00570 RNU6-1095P-201ENST00000516148 108 ntBASIC4.96□□□□□ -1.62
SOX1O00570 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.96□□□□□ -1.62
SOX1O00570 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX1O00570 AC093249.4-201ENST00000564755 259 ntBASIC4.96□□□□□ -1.62
SOX1O00570 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.96□□□□□ -1.62
SOX1O00570 VN1R91P-201ENST00000594377 169 ntBASIC4.96□□□□□ -1.62
SOX1O00570 MIR15A-201ENST00000607334 83 ntBASIC4.96□□□□□ -1.62
SOX1O00570 AC096772.1-201ENST00000609146 564 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms