Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC28A1O00337 KC877982.1-201ENST00000602313 470 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 DUXAP4-201ENST00000603046 613 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 MTCYBP22-201ENST00000603788 447 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 DPPA3P3-201ENST00000603842 430 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC28A1O00337 FTX_3.1-201ENST00000610451 147 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 AP002791.1-201ENST00000623291 381 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 AC093591.3-201ENST00000634516 308 ntBASIC2.79□□□□□ -1.96
SLC28A1O00337 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.79□□□□□ -1.96
SLC28A1O00337 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC28A1O00337 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SLC28A1O00337 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SLC28A1O00337 MIR34B-201ENST00000385076 84 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 ELOCP17-201ENST00000414751 326 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AL365184.2-201ENST00000431139 435 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC28A1O00337 RPL37P6-201ENST00000460682 294 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AC068587.2-201ENST00000478386 781 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AC006445.1-201ENST00000491925 405 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 RN7SL504P-201ENST00000494496 287 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 RPS27P26-201ENST00000494583 239 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 DSTNP2-201ENST00000504533 515 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SLC28A1O00337 ARL4AP2-201ENST00000507378 601 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.78□□□□□ -1.96
SLC28A1O00337 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.78□□□□□ -1.96
SLC28A1O00337 RNU6-201P-201ENST00000517100 61 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 RN7SKP258-201ENST00000517151 304 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC28A1O00337 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.78□□□□□ -1.96
SLC28A1O00337 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AC091489.2-201ENST00000566263 604 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 MIR4429-201ENST00000580105 73 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AC008739.2-201ENST00000597006 317 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AL353778.1-201ENST00000603149 408 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AC008277.2-201ENST00000605196 797 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AC009159.1-201ENST00000618386 642 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AL355493.4-201ENST00000618530 292 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC28A1O00337 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SLC28A1O00337 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SLC28A1O00337 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
SLC28A1O00337 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC28A1O00337 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC28A1O00337 SNORA38.1-201ENST00000364172 131 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 Y_RNA.245-201ENST00000364493 95 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SLC28A1O00337 RNU6-851P-201ENST00000384565 107 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 RNVU1-14-201ENST00000384770 164 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC28A1O00337 AL353777.1-201ENST00000425552 326 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 FCF1P1-201ENST00000432690 571 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC010153.1-201ENST00000432862 727 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC28A1O00337 AC118469.1-201ENST00000442943 488 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC28A1O00337 RPL12P25-201ENST00000455592 494 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC087588.1-201ENST00000462203 316 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC28A1O00337 AC074250.1-201ENST00000511117 192 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.77□□□□□ -1.97
SLC28A1O00337 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.77□□□□□ -1.97
SLC28A1O00337 AC009812.2-201ENST00000517657 457 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC28A1O00337 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC28A1O00337 HPRT1P3-201ENST00000539521 576 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC123904.2-201ENST00000548059 300 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC28A1O00337 MIR1254-2-201ENST00000579553 63 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 MIR3146-201ENST00000580367 79 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 MIR4444-1-201ENST00000581696 74 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC090616.2-202ENST00000584248 222 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 MIR4444-2-201ENST00000584390 74 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC28A1O00337 RPL23AP78-201ENST00000599928 470 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.77□□□□□ -1.97
SLC28A1O00337 AC063944.3-201ENST00000609969 533 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 MIR7844-201ENST00000616161 122 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC28A1O00337 AC002064.3-201ENST00000623448 346 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AP003399.1-201ENST00000637534 361 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 AC092447.7-201ENST00000422212 1621 ntBASIC2.77□□□□□ -1.97
SLC28A1O00337 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SLC28A1O00337 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SLC28A1O00337 AL355596.1-201ENST00000565399 3996 ntBASIC2.76□□□□□ -1.97
SLC28A1O00337 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms