Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RPS4XP7-201ENST00000406274 780 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 SSXP9-201ENST00000417503 292 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 USP9YP20-201ENST00000419224 558 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL356320.1-201ENST00000429616 163 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTND1P20-201ENST00000430341 950 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 FCF1P1-201ENST00000432690 571 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTND1P26-201ENST00000440488 538 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 snoU13.26-201ENST00000459452 105 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC008549.1-201ENST00000512900 643 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC022861.1-201ENST00000522981 663 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP003461.1-201ENST00000528866 78 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 OR4P1P-201ENST00000530808 1136 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC011260.1-201ENST00000578420 472 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC068313.1-201ENST00000604028 1008 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 DPRXP5-201ENST00000604662 539 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 TUG1_1.1-201ENST00000610654 145 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL607023.1-201ENST00000620045 248 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP000676.3-201ENST00000623299 569 ntBASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC087359.1-201ENST00000508335 1740 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNA5SP139-201ENST00000364340 117 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 MIR504-201ENST00000385065 83 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU2-47P-201ENST00000410649 186 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC098592.1-201ENST00000419352 333 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 YPEL5P1-201ENST00000419731 367 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL022400.1-201ENST00000423946 935 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTND5P2-201ENST00000442927 1142 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC010095.1-201ENST00000443543 144 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC002381.1-201ENST00000447049 280 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 OR6C5P-201ENST00000452388 923 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC096751.1-202ENST00000502691 1067 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AIG1P1-201ENST00000503376 148 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 COX7A2P2-201ENST00000505291 250 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 ANXA2P1-201ENST00000505539 926 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 SEM1P1-201ENST00000506694 209 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-1095P-201ENST00000516148 108 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNA5SP320-201ENST00000516263 124 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 SNORA31.11-201ENST00000516528 139 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 SNORA31.20-201ENST00000517111 133 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC109329.2-201ENST00000519658 482 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP004371.1-201ENST00000525240 214 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC126177.3-201ENST00000551839 688 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC106791.2-201ENST00000604680 391 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC004853.1-201ENST00000604902 698 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 U73479.1-201ENST00000618062 168 ntBASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.43□□□□□ -2.02
TMX2-CTNND1H3BSU7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-462P-201ENST00000362659 105 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6-837P-201ENST00000391056 108 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 SNORA3.2-201ENST00000408221 125 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 U3.37-201ENST00000408528 213 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTCO2P5-201ENST00000422621 426 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC079780.1-201ENST00000428259 207 ntBASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.42□□□□□ -2.02
TMX2-CTNND1H3BSU7 MTND4LP10-201ENST00000435146 291 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms