Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.11-201ENST00000362375 109 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 SNORA38.1-201ENST00000364172 131 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 SNORD81.2-201ENST00000365153 76 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 RPL35AP12-201ENST00000425362 338 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 HMGB1P27-201ENST00000431429 603 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AL591212.2-201ENST00000433923 257 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC093019.1-201ENST00000443135 252 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 FABP5P13-201ENST00000452144 328 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 RPL23AP81-201ENST00000455252 467 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AL590639.1-201ENST00000456484 337 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 RNU6-513P-201ENST00000516104 104 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 RPL7P20-201ENST00000520308 745 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC107953.1-201ENST00000522216 297 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 OR11H5P-201ENST00000554039 926 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 MIR5583-1-201ENST00000580941 59 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC092807.2-201ENST00000609367 243 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC013412.1-201ENST00000610687 192 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC006386.2-201ENST00000624491 75 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 AC012005.1-201ENST00000624575 75 ntBASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC85CA6NKD9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AL445487.1-201ENST00000415694 1580 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 OR4G2P-202ENST00000641004 1759 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.399-201ENST00000383955 105 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.530-201ENST00000384587 101 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 Y_RNA.534-201ENST00000384599 112 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 UBA52P6-201ENST00000399822 382 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 RPS12P24-201ENST00000412619 387 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC092809.3-201ENST00000415453 231 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 RPL21P66-201ENST00000426566 466 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 IFNA20P-201ENST00000436840 528 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC008264.1-201ENST00000447612 367 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 RPS15AP27-201ENST00000449183 343 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AMD1P1-201ENST00000457220 922 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC021660.1-201ENST00000465006 554 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC012181.1-201ENST00000479895 423 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AL049874.1-201ENST00000489560 388 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 UBE2CP3-201ENST00000502715 450 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC112206.3-201ENST00000514578 389 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 SNORA70.16-201ENST00000516390 95 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 MYL12AP1-201ENST00000518490 515 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC243972.3-201ENST00000539655 198 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 BNIP3P25-201ENST00000596023 559 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC022893.3-201ENST00000607665 437 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AP002826.1-201ENST00000608835 315 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 AC090132.2-201ENST00000615881 347 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 MIR8057-201ENST00000620957 69 ntBASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC85CA6NKD9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC85CA6NKD9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC85CA6NKD9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC85CA6NKD9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC85CA6NKD9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CCDC85CA6NKD9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC85CA6NKD9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 RNA5SP167-201ENST00000365461 116 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 MTND3P8-201ENST00000412909 339 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 Z85995.1-201ENST00000415547 335 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 USP9YP20-201ENST00000419224 558 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 AL356867.1-201ENST00000429623 299 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 TBCAP1-201ENST00000436520 327 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 AC004938.1-201ENST00000438468 308 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 RNA5SP246-201ENST00000458909 119 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 RNU7-66P-201ENST00000459469 62 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.65□□□□□ -1.67
CCDC85CA6NKD9 APOOP4-201ENST00000513530 597 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms