Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC116562.3-201ENST00000506136 177 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC117522.1-201ENST00000509821 380 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC068587.5-201ENST00000528506 175 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC103843.2-201ENST00000530523 682 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AL157687.1-201ENST00000554853 619 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC092325.1-201ENST00000566449 554 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 MIR4801-201ENST00000582704 82 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 DPPA3P3-201ENST00000603842 430 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 RBM11P1-201ENST00000604951 799 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC008536.2-201ENST00000607284 349 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 MIR7975-201ENST00000619350 68 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AL589994.2-201ENST00000621124 579 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
TBC1D3FA6NER0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 RNU6-1322P-201ENST00000364309 107 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 Y_RNA.402-201ENST00000383972 102 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 Y_RNA.481-201ENST00000384373 102 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 RNU6-606P-201ENST00000384721 111 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 MIR454-201ENST00000390180 115 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 RNU2-71P-201ENST00000411395 189 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AL451054.2-201ENST00000420896 202 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 ELOCP14-201ENST00000428070 331 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 CYCSP4-201ENST00000429682 331 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 MRPS10P2-201ENST00000431226 381 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AL606489.2-201ENST00000433886 234 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 RPL23AP83-201ENST00000434984 473 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AF228730.2-201ENST00000438784 848 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 ELOCP7-201ENST00000439968 331 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 BNIP3P2-201ENST00000441221 577 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 RPS20P20-201ENST00000460498 340 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC109927.2-201ENST00000506416 303 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 RN7SKP258-201ENST00000517151 304 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 MIR3921-201ENST00000577308 85 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC007621.1-201ENST00000604544 437 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AL161756.2-201ENST00000604597 246 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC106900.2-201ENST00000604994 317 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AC093788.1-201ENST00000609356 927 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 MIR1321-201ENST00000637766 79 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TBC1D3FA6NER0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RNU4-48P-201ENST00000365559 182 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RNU6-946P-201ENST00000383878 107 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 SNORA24.1-201ENST00000384401 135 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RNU6-14P-201ENST00000384630 106 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RNVU1-14-201ENST00000384770 164 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AL591416.1-201ENST00000404015 867 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 OR51A5P-201ENST00000415429 942 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 ZNF90P2-204ENST00000419323 1075 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 MTCO1P20-201ENST00000425366 358 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RPL7L1P10-201ENST00000427790 463 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AL596276.1-201ENST00000434465 418 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RPL36AP6-201ENST00000435770 321 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 RPS3AP12-201ENST00000443616 753 ntBASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.61□□□□□ -1.83
TBC1D3FA6NER0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms