Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AL606923.1-201ENST00000406616 190 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 CALM2P2-201ENST00000428512 440 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC236972.2-201ENST00000434979 310 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RPL7P28-201ENST00000437739 740 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 MRPL50P4-201ENST00000446432 475 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RNU6-333P-201ENST00000459117 107 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RPL21P99-201ENST00000480369 423 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RPL23AP55-201ENST00000498163 452 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC026427.2-201ENST00000506228 536 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC103851.1-201ENST00000506833 274 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 NDUFB4P9-201ENST00000511646 388 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RNU6-277P-201ENST00000516272 106 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RNU6-1092P-201ENST00000516955 87 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RNU6-1073P-201ENST00000517182 106 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 BTF3P12-201ENST00000519620 469 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 PSMA2P1-201ENST00000526365 646 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC109635.4-202ENST00000531666 412 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AL355375.2-201ENST00000574825 175 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 MIR4742-201ENST00000581069 85 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 MIR4293-201ENST00000584305 78 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC021646.1-201ENST00000605469 484 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC012443.1-201ENST00000605605 231 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AC126177.8-201ENST00000618339 1015 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 RMST_7.1-201ENST00000621935 268 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 MIR1302-1-201ENST00000637932 143 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 AP001350.1-201ENST00000601906 1524 ntBASIC4.04□□□□□ -1.76
CCDC78A2IDD5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC78A2IDD5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 DDX10P1-201ENST00000448545 1933 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AL365440.1-201ENST00000436135 2167 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 FRG1CP-201ENST00000358464 769 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 SNORA60-201ENST00000362396 134 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 RNU6-82P-201ENST00000363970 107 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 SNORA62.1-201ENST00000364287 154 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 Y_RNA.315-201ENST00000365117 102 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 Y_RNA.384-201ENST00000383909 102 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 RNU6-1029P-201ENST00000384109 107 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 RPL32P23-201ENST00000397237 405 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 RNU2-47P-201ENST00000410649 186 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 HMGB1P18-201ENST00000438801 619 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AL121871.1-201ENST00000443413 436 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC234775.1-201ENST00000454247 670 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 SNRPFP3-201ENST00000457792 225 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 HMGB1P22-201ENST00000505315 124 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 KLHL2P1-201ENST00000508691 521 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC004062.1-201ENST00000509926 645 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 FAM206BP-201ENST00000510179 541 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 MIR2116-201ENST00000517221 80 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 SUMO2P20-201ENST00000520803 283 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 OR5D17P-201ENST00000531492 978 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC012182.1-201ENST00000570133 895 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 MIR4644-201ENST00000579929 84 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 PART1_1.1-201ENST00000611761 217 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AC104237.2-201ENST00000612456 443 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 SNHG22-203ENST00000617833 660 ntBASIC4.03□□□□□ -1.76
CCDC78A2IDD5 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC78A2IDD5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CCDC78A2IDD5 GABPAP-201ENST00000419271 1356 ntBASIC4.02□□□□□ -1.77
CCDC78A2IDD5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC78A2IDD5 MIR372-201ENST00000362225 67 ntBASIC4.02□□□□□ -1.77
CCDC78A2IDD5 RNU4-66P-201ENST00000365199 138 ntBASIC4.02□□□□□ -1.77
CCDC78A2IDD5 SNORA32.2-201ENST00000384049 122 ntBASIC4.02□□□□□ -1.77
CCDC78A2IDD5 RNU6-1013P-201ENST00000384180 107 ntBASIC4.02□□□□□ -1.77
CCDC78A2IDD5 AL022722.2-201ENST00000402519 180 ntBASIC4.02□□□□□ -1.77
CCDC78A2IDD5 AL590004.1-201ENST00000405321 300 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms