Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMIM28A0A1B0GU29 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-1078P-201ENST00000364522 103 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 SNORA1.3-201ENST00000384676 136 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 RPS4XP3-201ENST00000398541 413 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 MIR320C1-201ENST00000408566 88 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 RNA5SP38-201ENST00000410750 119 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 MTCO1P17-201ENST00000411522 491 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 RAP1BP1-201ENST00000412709 553 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC098592.1-201ENST00000419352 333 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC010099.3-201ENST00000423896 409 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 RPL27AP8-201ENST00000424277 446 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AL008629.1-201ENST00000438615 184 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 SNORD53-201ENST00000579969 78 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-88P-201ENST00000606801 100 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC072039.2-201ENST00000608883 439 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC103710.4-201ENST00000609301 899 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC013412.1-201ENST00000610687 192 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC069234.5-201ENST00000611056 416 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC090132.2-201ENST00000615881 347 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AL031667.3-201ENST00000620124 655 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC007671.2-201ENST00000637344 619 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 AC069528.2-201ENST00000624849 1991 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 MTCO1P9-201ENST00000505577 1534 ntBASIC2.63□□□□□ -1.99
SMIM28A0A1B0GU29 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC104454.1-201ENST00000421341 1401 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RNU1-39P-201ENST00000383897 165 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-1027P-201ENST00000383998 107 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-769P-201ENST00000384407 104 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 MIR592-201ENST00000384959 97 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AL590084.2-201ENST00000401481 382 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RN7SKP123-201ENST00000410732 291 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AL593851.1-201ENST00000426171 157 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 UBE2FP3-201ENST00000436366 524 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RPL32P28-201ENST00000443577 397 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 TPT1P14-201ENST00000448018 505 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AL590664.1-201ENST00000448065 339 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RPL31P60-201ENST00000478450 367 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-1129P-201ENST00000515964 104 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 RNU6-798P-201ENST00000516912 103 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AP003461.1-201ENST00000528866 78 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 LRRC34P1-201ENST00000542742 915 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AP002770.2-201ENST00000543613 532 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 DNAJC8P1-201ENST00000554535 372 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 MIR4506-201ENST00000584693 77 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 BNIP3P23-201ENST00000599655 511 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AP000811.1-201ENST00000603803 651 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC068313.1-201ENST00000604028 1008 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC106791.2-201ENST00000604680 391 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AL139344.1-201ENST00000605228 195 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 Z99289.3-201ENST00000605586 594 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC046143.2-201ENST00000609789 160 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AP000676.4-201ENST00000624659 623 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 AC099063.3-201ENST00000642066 185 ntBASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SMIM28A0A1B0GU29 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SMIM28A0A1B0GU29 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.61□□□□□ -1.99
SMIM28A0A1B0GU29 MTND5P33-201ENST00000571250 1450 ntBASIC2.61□□□□□ -1.99
SMIM28A0A1B0GU29 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMIM28A0A1B0GU29 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.61□□□□□ -1.99
SMIM28A0A1B0GU29 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms