Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 ZFAND6P1-201ENST00000434138 605 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 UBE2D3P1-201ENST00000436669 444 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 THAP5P1-201ENST00000439089 262 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 HIGD1AP2-201ENST00000446367 280 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AL353705.4-201ENST00000449661 238 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AP1S2P1-201ENST00000457344 379 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 MRPS17P3-201ENST00000465453 385 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC138853.1-201ENST00000503549 823 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC124947.2-202ENST00000552735 133 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AL132857.1-201ENST00000555180 708 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC027176.1-201ENST00000560204 514 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC026464.5-201ENST00000562497 722 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC093510.2-201ENST00000562820 896 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 MIR4419B-201ENST00000577260 68 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 HMGN2P15-201ENST00000585707 270 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AL161729.4-201ENST00000604650 476 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC010378.1-201ENST00000619270 362 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 MIR6130-201ENST00000619419 109 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AC012150.2-201ENST00000621300 544 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 MIR6873-201ENST00000622788 63 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 AL158801.5-201ENST00000623123 465 ntBASIC1.46□□□□□ -2.18
TRAV1-1A0A0B4J248 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 HMGB1P17-201ENST00000403495 628 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 BTF3P7-201ENST00000407097 488 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL133264.1-201ENST00000407157 562 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU4-53P-201ENST00000410828 140 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 RPS7P9-201ENST00000414704 586 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL356320.1-201ENST00000429616 163 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AC234064.1-201ENST00000436312 247 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 IFNA20P-201ENST00000436840 528 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 DDX3P2-201ENST00000446138 111 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL096803.2-201ENST00000450032 677 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 MTATP6P7-201ENST00000453315 681 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 BZW1P2-201ENST00000473537 826 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 COL6A4P2-205ENST00000509855 506 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 BNIP3P24-201ENST00000593398 557 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL109918.3-201ENST00000603072 338 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 DUXAP11-201ENST00000603858 526 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AC021749.1-201ENST00000604322 607 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 OR10AB1P-201ENST00000609613 938 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AC013412.1-201ENST00000610687 192 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL627230.6-201ENST00000611129 280 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 Y_RNA.783-201ENST00000613546 102 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL445493.3-201ENST00000619568 477 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AC004009.2-201ENST00000623016 728 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AC064859.1-201ENST00000624741 174 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL590396.4-201ENST00000636779 956 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 MTCO1P4-201ENST00000520516 1409 ntBASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
TRAV1-1A0A0B4J248 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 U8.2-201ENST00000363156 134 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-549P-201ENST00000384433 107 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU4-27P-201ENST00000410889 139 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 PPP1R11P2-201ENST00000423543 382 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 MTND2P5-201ENST00000432656 1006 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 Z82210.1-201ENST00000440037 231 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 RPL7P12-201ENST00000446719 750 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 MTCO3P11-201ENST00000455103 774 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC025181.1-201ENST00000477507 416 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC013828.1-201ENST00000481845 158 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 BOLA3P3-201ENST00000505182 232 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC091860.1-201ENST00000505723 432 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AC107393.1-201ENST00000512403 346 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 RNU6-1256P-201ENST00000516539 103 ntBASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV1-1A0A0B4J248 AP005902.1-201ENST00000521358 186 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms