Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AL513185.2-201ENST00000425543 193 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 BNIP3P2-201ENST00000441221 577 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 SSXP1-201ENST00000453640 473 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 RPS29P23-201ENST00000458635 123 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AC093752.1-206ENST00000511823 336 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AP005597.4-201ENST00000526762 229 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AK6P1-201ENST00000540219 478 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AC079791.1-201ENST00000605356 973 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 AC068276.1-201ENST00000605793 379 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 U4atac.1-201ENST00000618345 95 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 MIR7157-201ENST00000635801 60 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 LINC02211-204ENST00000642024 1070 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 CDC27P3-201ENST00000635418 1910 ntBASIC1.19□□□□□ -2.22
TRAV30A0A087WSZ9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AL356292.1-201ENST00000283110 373 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 Z85995.1-201ENST00000415547 335 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 RPS3AP9-201ENST00000417027 792 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC244453.4-201ENST00000419150 388 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC246680.2-201ENST00000422106 389 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC244035.1-201ENST00000430042 390 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC007677.1-201ENST00000445757 515 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AMD1P1-201ENST00000457220 922 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 RPL31P60-201ENST00000478450 367 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC008837.1-201ENST00000511513 412 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 PRR13P7-201ENST00000605538 430 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 MIR8081-201ENST00000611533 95 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 AC093838.1-201ENST00000613014 469 ntBASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TRAV30A0A087WSZ9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 MIR504-201ENST00000385065 83 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 SNORA67.6-201ENST00000391093 99 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AC099548.1-201ENST00000421443 426 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 SNORA59A-201ENST00000459326 152 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AC107398.1-201ENST00000486904 505 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 RNU6-798P-201ENST00000516912 103 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 SNORA31.24-201ENST00000517232 57 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 MIR3198-2-201ENST00000577868 80 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 FAM60CP-201ENST00000591086 664 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 BNIP3P25-201ENST00000596023 559 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AL035411.2-201ENST00000604022 421 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AL021997.1-201ENST00000605757 193 ntBASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV30A0A087WSZ9 RNU6-1083P-201ENST00000384022 107 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 SNORA8-201ENST00000384574 139 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 BTF3L4P2-201ENST00000392798 346 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 HMGN2P39-201ENST00000398005 273 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 AL035405.1-201ENST00000400795 710 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 MICF-203ENST00000432679 129 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 HMGN2P3-201ENST00000433603 273 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 HMGN2P5-201ENST00000436882 273 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 USP9YP10-201ENST00000454868 628 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 SNORD121B-201ENST00000458838 81 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 AC109464.2-201ENST00000510242 943 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 LTV1P1-201ENST00000510683 1237 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 EIF5A2P1-201ENST00000564027 460 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 MIR4713-201ENST00000582691 75 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 AC012669.1-201ENST00000603209 283 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 AC068057.2-201ENST00000624047 895 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 OR5H6-203ENST00000642105 978 ntBASIC1.16□□□□□ -2.22
TRAV30A0A087WSZ9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
TRAV30A0A087WSZ9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
TRAV30A0A087WSZ9 U8.1-201ENST00000362843 134 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 RNA5SP126-201ENST00000365092 109 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 RNU6-98P-201ENST00000384173 107 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 MIR320A-201ENST00000385302 82 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 SNORA67.5-201ENST00000391036 107 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AL356421.1-201ENST00000403255 413 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AL358453.1-201ENST00000422522 250 ntBASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV30A0A087WSZ9 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms