Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A3BPQ9Y5P4 AC103710.2-202ENST00000641454 2853 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-1035P-201ENST00000384477 107 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR301A-201ENST00000385261 86 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AL590002.1-201ENST00000406554 418 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AL353193.1-201ENST00000421444 268 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AL451062.2-201ENST00000427515 271 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 ELOCP14-201ENST00000428070 331 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 ELOCP7-201ENST00000439968 331 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 RANP8-201ENST00000444720 713 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 MTND1P18-201ENST00000448191 573 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 RPS29P15-201ENST00000458329 171 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 RN7SL542P-201ENST00000467147 294 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 RPL7P5-201ENST00000471472 736 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 Y_RNA.693-201ENST00000516641 110 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU1-45P-201ENST00000517191 141 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC087369.1-201ENST00000520775 996 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC027807.1-201ENST00000559921 996 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC068792.1-201ENST00000621354 417 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 FP236240.3-201ENST00000623061 327 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 AC034229.5-201ENST00000624258 185 ntBASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
COL4A3BPQ9Y5P4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 OR4G2P-201ENST00000328113 903 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 Y_RNA.9-201ENST00000362354 101 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 RNA5SP97-201ENST00000365006 84 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 SNORD115-7-201ENST00000365306 82 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 Y_RNA.372-201ENST00000365599 102 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 Y_RNA.409-201ENST00000383990 98 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-140P-201ENST00000384566 108 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 MIR554-201ENST00000384874 96 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 UBE2V1P10-201ENST00000414685 269 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 MTND1P4-201ENST00000435196 415 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 GMFBP1-201ENST00000467831 427 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 TRBV1-201ENST00000476502 284 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 RN7SL323P-201ENST00000494712 295 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC104806.1-201ENST00000508720 308 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 RNU6-123P-201ENST00000516163 102 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC023632.4-201ENST00000517783 191 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC104383.1-201ENST00000530297 370 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AL512360.1-201ENST00000555346 234 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AMZ2P1-203ENST00000565833 850 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC136601.2-201ENST00000604356 474 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC007621.1-201ENST00000604544 437 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 AC092954.2-201ENST00000609103 430 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 PLCE1P1-201ENST00000622094 305 ntBASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A3BPQ9Y5P4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL4A3BPQ9Y5P4 AC007656.2-201ENST00000624902 4547 ntBASIC4.34□□□□□ -1.72
COL4A3BPQ9Y5P4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A3BPQ9Y5P4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms