Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC107934.2-201ENST00000518653 310 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL133271.1-201ENST00000538229 291 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 TRAV28-201ENST00000557548 323 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 PCMTD1P2-201ENST00000565017 355 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC004908.2-201ENST00000609090 574 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC010133.1-201ENST00000615809 842 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 MIR7844-201ENST00000616161 122 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AL603755.1-201ENST00000619504 163 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC012150.2-201ENST00000621300 544 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC099506.2-201ENST00000623074 221 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC097520.1-201ENST00000624435 385 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC019226.2-201ENST00000625973 424 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 AC092125.1-201ENST00000562568 1995 ntBASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PCDHGA1Q9Y5H4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RNU1-70P-201ENST00000362618 164 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RNU6-553P-201ENST00000364047 96 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RNA5SP354-201ENST00000391247 136 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC110754.1-201ENST00000399740 601 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RN7SKP220-201ENST00000410611 288 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RNU6-55P-201ENST00000411092 107 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RNU6-954P-201ENST00000411355 107 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 HMGN2P30-201ENST00000423237 256 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC109583.1-201ENST00000432156 268 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 USP12PX-201ENST00000432383 1057 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 snoU13.28-201ENST00000459235 104 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RN7SL442P-201ENST00000473804 320 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 OR5BM1P-201ENST00000512021 366 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC135628.1-201ENST00000568867 534 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC010653.1-201ENST00000571108 881 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 UBL5P2-201ENST00000583788 219 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 PRELID3BP8-201ENST00000604148 295 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC091965.4-201ENST00000607691 587 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AC103710.1-201ENST00000610003 901 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 AL356266.1-201ENST00000623311 483 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 MTND5P27-201ENST00000428871 1720 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA1Q9Y5H4 RNU6-501P-201ENST00000364072 100 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AL031577.2-201ENST00000404133 280 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 RN7SKP140-201ENST00000411196 284 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 SAR1AP4-201ENST00000429225 591 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 BX679664.1-201ENST00000434429 253 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 TPT1P14-201ENST00000448018 505 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 MTND3P12-201ENST00000559068 328 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC090888.1-201ENST00000561335 1141 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC091489.2-201ENST00000566263 604 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC012435.1-202ENST00000568772 240 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 ELOCP29-201ENST00000588193 334 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AF038458.1-201ENST00000588406 262 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC002545.1-201ENST00000592511 181 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AL136363.1-201ENST00000605349 337 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AC239868.4-201ENST00000608318 671 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.06□□□□□ -1.92
PCDHGA1Q9Y5H4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms