Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA9Q9Y5G4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC007785.2-201ENST00000598627 1916 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 Y_RNA.245-201ENST00000364493 95 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-434P-201ENST00000384376 107 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC091390.3-201ENST00000426478 338 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 ZNF863P-201ENST00000426746 417 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 RPL23AP52-201ENST00000439311 478 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 PMCHL2-203ENST00000457791 237 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 SCARNA18-201ENST00000459004 134 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 Y_RNA.654-201ENST00000497848 106 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AL592156.1-201ENST00000508758 304 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 RNA5SP309-201ENST00000516670 106 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-1282P-201ENST00000516735 96 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 TRAV28-201ENST00000557548 323 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 ZNF192P1-203ENST00000565888 810 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR4286-201ENST00000580651 93 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC091178.1-203ENST00000584586 279 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR15A-201ENST00000607334 83 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 Z82243.1-201ENST00000609432 473 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC022306.2-201ENST00000617563 647 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC100810.6-201ENST00000638068 285 ntBASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA9Q9Y5G4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL359693.1-201ENST00000614959 2407 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 RNA5SP22-201ENST00000365393 109 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 RHOT1P2-201ENST00000366423 333 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-767P-201ENST00000384132 107 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-393P-201ENST00000384475 107 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC092809.3-201ENST00000415453 231 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL356095.1-201ENST00000417217 199 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL139095.3-201ENST00000419672 1203 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL451062.2-201ENST00000427515 271 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL451050.1-201ENST00000450126 415 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 HMGN2P26-201ENST00000463169 339 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 RPS23P3-201ENST00000470993 430 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 RNA5SP290-201ENST00000517133 127 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 PSMA2P1-201ENST00000526365 646 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 TVP23BP1-201ENST00000557500 617 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC013553.2-201ENST00000604244 589 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AL161798.1-201ENST00000604630 131 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 FAM27D1-201ENST00000612308 341 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA9Q9Y5G4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR493-201ENST00000385254 89 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-1009P-201ENST00000390996 107 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 AL162578.1-201ENST00000406202 378 ntBASIC4.02□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SKP202-201ENST00000410439 330 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms