Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL603758.1-201ENST00000618654 241 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC099654.5-201ENST00000636479 350 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC138649.5-201ENST00000637456 137 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 MTND5P3-201ENST00000438536 1800 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AP001148.1-201ENST00000624124 2359 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 Y_RNA.70-201ENST00000362886 110 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 Y_RNA.160-201ENST00000363677 92 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-263P-201ENST00000363811 107 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-432P-201ENST00000384196 109 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-74P-201ENST00000384235 107 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-606P-201ENST00000384721 111 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 MIR1-2-201ENST00000384961 85 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-754P-201ENST00000391166 107 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-1158P-201ENST00000391167 107 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC068050.1-201ENST00000394891 380 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU2-9P-201ENST00000410194 145 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU4-78P-201ENST00000410940 126 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC092447.6-201ENST00000414578 210 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RPS20P5-201ENST00000434808 360 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AL138799.3-201ENST00000438968 350 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC016691.1-201ENST00000441321 413 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 SNRPEP8-201ENST00000442866 260 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RPS3AP12-201ENST00000443616 753 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 PRDX3P3-201ENST00000447765 522 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 SNRPGP6-201ENST00000451124 220 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC234775.1-201ENST00000454247 670 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 HMGB3P30-201ENST00000457863 606 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 snoU13.3-201ENST00000459441 104 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 SNRPGP3-201ENST00000469405 227 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC018710.1-201ENST00000506509 158 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC114781.4-201ENST00000513707 639 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 SNORA40.12-201ENST00000516329 111 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-835P-201ENST00000516974 104 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-1231P-201ENST00000517185 103 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 ADI1P3-201ENST00000549509 470 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 HIF1AP1-201ENST00000553642 175 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 MIR3186-201ENST00000577404 85 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AC093838.1-201ENST00000613014 469 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 MIR8058-201ENST00000615737 89 ntBASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSX2IPQ9Y2D8 AL021368.2-201ENST00000606125 5352 ntBASIC4.03□□□□□ -1.77
SSX2IPQ9Y2D8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SSX2IPQ9Y2D8 MTND4P12-201ENST00000498999 1377 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC093908.1-201ENST00000623125 8092 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 CBX3P1-201ENST00000325243 554 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 HSPE1P11-201ENST00000339579 310 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-223P-201ENST00000362830 107 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-797P-201ENST00000363101 109 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 SNORA69-201ENST00000383895 132 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 SNORD3H-201ENST00000384486 214 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 MIR183-201ENST00000384958 110 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-837P-201ENST00000391056 108 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 RNU2-37P-201ENST00000410695 177 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 ATP5A1P2-201ENST00000412323 255 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 RPL21P111-201ENST00000418453 477 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 BEND7P1-201ENST00000422058 457 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 OR4K11P-201ENST00000431829 904 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 KCTD9P3-201ENST00000434597 1169 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 RPS15AP9-201ENST00000439856 381 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AL356010.1-201ENST00000456364 102 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC008628.2-201ENST00000502605 298 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC026726.1-201ENST00000512859 601 ntBASIC4.02□□□□□ -1.77
SSX2IPQ9Y2D8 AC114797.1-201ENST00000514003 728 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms