Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL590704.1-201ENST00000402856 794 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 SAR1AP4-201ENST00000429225 591 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 RPL23AP52-201ENST00000439311 478 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC233279.1-201ENST00000455300 423 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 RPS15AP34-201ENST00000487776 387 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC090136.1-201ENST00000520009 240 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AP001330.4-201ENST00000604350 154 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AL050343.2-201ENST00000607338 280 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC135507.2-201ENST00000612443 309 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AL355810.1-201ENST00000614629 552 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC034102.8-201ENST00000615146 484 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC140479.6-201ENST00000633535 357 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AC099654.10-201ENST00000640395 161 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 AL158163.1-201ENST00000603915 1649 ntBASIC4.96□□□□□ -1.62
DDX41Q9UJV9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
DDX41Q9UJV9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 Y_RNA.301-201ENST00000364990 103 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 MIR514A1-201ENST00000385133 98 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 BX682237.1-201ENST00000415016 335 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 RAC1P3-201ENST00000416129 580 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 BX842559.1-201ENST00000419615 532 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 RPL21P91-201ENST00000429231 479 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 USP9YP7-201ENST00000436723 430 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC008264.1-201ENST00000447612 367 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 USP9YP32-201ENST00000452432 430 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC087588.1-201ENST00000462203 316 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 RN7SL691P-201ENST00000494487 301 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 MTCO3P9-201ENST00000506989 781 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 RPL39P5-202ENST00000512505 151 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 RNU6-143P-201ENST00000516942 93 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AP000889.2-201ENST00000532684 490 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AL442663.2-201ENST00000554385 511 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC091178.1-203ENST00000584586 279 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC016727.1-205ENST00000605437 569 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 AC112200.1-201ENST00000625015 234 ntBASIC4.95□□□□□ -1.62
DDX41Q9UJV9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DDX41Q9UJV9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RNU6-715P-201ENST00000365204 103 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 SNORA57.1-201ENST00000391227 145 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RPS26P8-201ENST00000393490 348 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RN7SKP27-201ENST00000410684 333 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 TOMM22P1-201ENST00000418578 312 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AL160275.3-201ENST00000423876 471 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RPL27AP8-201ENST00000424277 446 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 FTH1P6-201ENST00000430768 320 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RNU7-167P-201ENST00000459160 62 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RPL21P93-201ENST00000480465 489 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AC079140.5-201ENST00000507882 310 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AC008958.1-201ENST00000511047 682 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 Y_RNA.701-201ENST00000516812 110 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 RANP9-201ENST00000519957 271 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AP001804.3-201ENST00000525146 880 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AC107016.1-201ENST00000550463 337 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 MED28P6-201ENST00000558776 231 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.94□□□□□ -1.62
DDX41Q9UJV9 ZYXP1-201ENST00000617638 118 ntBASIC4.94□□□□□ -1.62
DDX41Q9UJV9 AC007546.1-201ENST00000619452 559 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms