Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 CBWD4P-201ENST00000445695 655 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 MTND1P27-201ENST00000451117 902 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 MTCO2P29-201ENST00000465212 189 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 MTND4LP3-201ENST00000468320 276 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 RBM43P1-201ENST00000476891 1081 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 RAP1BP2-201ENST00000478270 544 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC022447.1-201ENST00000515358 464 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC137800.2-201ENST00000574375 120 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 MIR4474-201ENST00000579189 78 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC002545.1-201ENST00000592511 181 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC146944.4-201ENST00000602697 718 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 MIR6076-201ENST00000617521 113 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC027309.3-201ENST00000623419 351 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC139792.2-201ENST00000624218 587 ntBASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMA1Q9UHB6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 Y_RNA.201-201ENST00000364052 96 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 RNU6-741P-201ENST00000383889 107 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 SNORA1.3-201ENST00000384676 136 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 Z85995.1-201ENST00000415547 335 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 MORF4L1P6-201ENST00000418771 268 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC007283.2-201ENST00000424739 197 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 FCF1P1-201ENST00000432690 571 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC010153.1-201ENST00000432862 727 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AL353705.1-201ENST00000433468 480 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AL590664.1-201ENST00000448065 339 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 MTND1P29-201ENST00000448112 647 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 RN7SL542P-201ENST00000467147 294 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 ARL2BPP4-201ENST00000506854 471 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 MTND4P2-201ENST00000507767 1203 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 NDUFB4P2-201ENST00000509515 391 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 RN7SKP43-201ENST00000516173 320 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 OR5G4P-201ENST00000525251 760 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC128657.1-201ENST00000549459 145 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 ARL2BPP2-201ENST00000550907 489 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC006130.2-201ENST00000586202 326 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 DUXAP4-201ENST00000603046 613 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC010678.1-201ENST00000614118 713 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 PISRT1-201ENST00000626175 531 ntBASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMA1Q9UHB6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 MTND5P19-201ENST00000424872 1794 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC007785.2-201ENST00000598627 1916 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 RNA5SP50-201ENST00000363731 107 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 RNU1-33P-201ENST00000364249 162 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 RNU2-36P-201ENST00000410361 191 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 USP9YP36-201ENST00000424581 829 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC009961.2-201ENST00000435771 251 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 HMGN2P20-201ENST00000437531 273 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC009969.1-201ENST00000438726 172 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 USP9YP15-201ENST00000442391 422 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 GAPDHP17-201ENST00000449858 1001 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC008155.2-201ENST00000464337 397 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 RPS20P22-201ENST00000473700 357 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 RPL30P14-201ENST00000482744 348 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 SNORA18.6-201ENST00000516792 115 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 RN7SKP258-201ENST00000517151 304 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 IGHV3-76-201ENST00000522465 295 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms