Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AC244505.4-201ENST00000434905 287 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 LARP1BP3-201ENST00000437229 869 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 SSXP5-201ENST00000443473 287 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 OR6K5P-201ENST00000447050 945 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 SNORA31.21-201ENST00000517180 77 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AP001804.3-201ENST00000525146 880 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 OSBPL9P5-201ENST00000542581 171 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AC007954.1-201ENST00000554198 494 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AC090888.1-201ENST00000561335 1141 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 MIR544B-201ENST00000582372 78 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AC083760.1-201ENST00000589621 670 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AL020991.1-201ENST00000612314 373 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 Z99129.2-201ENST00000619967 314 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 AF246928.1-201ENST00000623768 87 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 GABRG2-229ENST00000641017 3628 ntBASIC2.72□□□□□ -1.97
APOBEC3BQ9UH17 RNU6-500P-201ENST00000362349 107 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 RNU6-97P-201ENST00000363387 104 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 MIR34A-201ENST00000385130 110 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 RN7SKP266-201ENST00000410232 287 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 RPS15AP38-201ENST00000413110 372 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC099677.1-201ENST00000420575 175 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AL365203.2-201ENST00000423444 196 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 MTCYBP39-201ENST00000437562 491 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 RPS29P6-201ENST00000438196 145 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 ZNF114P1-201ENST00000453500 292 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC104563.1-201ENST00000476147 376 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 BET1P1-201ENST00000482276 359 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC005178.1-201ENST00000508392 440 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AP004247.1-201ENST00000531556 1289 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC018630.1-201ENST00000541376 925 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 ZNF861P-201ENST00000588126 639 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 NUTF2P8-201ENST00000604593 363 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC019159.1-201ENST00000605094 187 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC122133.1-201ENST00000613964 233 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AL603755.1-201ENST00000619504 163 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC007494.3-201ENST00000624660 743 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 IGHVIII-44-202ENST00000636235 289 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 MTND5P19-201ENST00000424872 1794 ntBASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBEC3BQ9UH17 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 CUL1P1-201ENST00000509510 2425 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 VTRNA1-1-201ENST00000363120 99 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 MIR181A2-201ENST00000384863 110 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 RNU6-920P-201ENST00000410926 92 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 MTCO1P17-201ENST00000411522 491 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 RPL23AP39-201ENST00000415533 405 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AL451074.5-201ENST00000415894 435 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AL137014.1-201ENST00000420490 1226 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 UBE2D3P2-201ENST00000424409 445 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 OR4K11P-201ENST00000431829 904 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AL513043.1-201ENST00000439124 535 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AP000936.2-201ENST00000447151 681 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AC106872.3-201ENST00000495104 446 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 RPF2P2-201ENST00000504693 896 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 RNU6-528P-201ENST00000516926 100 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AP003497.1-201ENST00000528472 562 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.7□□□□□ -1.98
APOBEC3BQ9UH17 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms