Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL590282.1-201ENST00000610379 1136 ntBASIC3.73□□□□□ -1.81
HDAC6Q9UBN7 AL360181.4-201ENST00000621752 134 ntBASIC3.73□□□□□ -1.81
HDAC6Q9UBN7 AC091953.2-201ENST00000623979 160 ntBASIC3.73□□□□□ -1.81
HDAC6Q9UBN7 AC019226.1-201ENST00000625666 515 ntBASIC3.73□□□□□ -1.81
HDAC6Q9UBN7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HDAC6Q9UBN7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.73□□□□□ -1.81
HDAC6Q9UBN7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.73□□□□□ -1.81
HDAC6Q9UBN7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 RNU1-75P-201ENST00000347264 129 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 RNU6-600P-201ENST00000362524 99 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 RNY1P12-201ENST00000364251 105 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 RNU6-259P-201ENST00000383999 107 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 RNU6-648P-201ENST00000410190 107 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 ELOCP17-201ENST00000414751 326 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC010493.1-201ENST00000513479 292 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 APOOP4-201ENST00000513530 597 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 Vault.3-201ENST00000516676 95 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AL133271.1-201ENST00000538229 291 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC005476.1-201ENST00000554427 397 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AL133153.1-201ENST00000557756 303 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC009063.1-201ENST00000563342 702 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AL391840.1-201ENST00000571144 367 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 MIR3118-1-201ENST00000581787 76 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AL353748.2-201ENST00000622148 471 ntBASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.72□□□□□ -1.81
HDAC6Q9UBN7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HDAC6Q9UBN7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HDAC6Q9UBN7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.71□□□□□ -1.81
HDAC6Q9UBN7 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.81
HDAC6Q9UBN7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 UBA52P6-201ENST00000399822 382 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 Z99755.1-201ENST00000414048 380 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC019097.1-201ENST00000424783 735 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 MTND3P21-201ENST00000433774 331 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AL359385.1-201ENST00000456509 365 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 S100A11P2-201ENST00000467589 312 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 RPS3AP17-201ENST00000472594 777 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC011825.1-201ENST00000484967 388 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 VN1R104P-201ENST00000505115 1009 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 HMGB1P22-201ENST00000505315 124 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC010587.1-201ENST00000505809 469 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 MTND2P33-201ENST00000506452 1031 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 KLHL2P1-201ENST00000508691 521 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AP003181.2-201ENST00000528941 181 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC087481.2-201ENST00000565492 330 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC245517.5-201ENST00000611529 162 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AL162274.2-201ENST00000614406 332 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC099842.1-201ENST00000619919 596 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 AC118273.1-201ENST00000525324 3006 ntBASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HDAC6Q9UBN7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 RNU6-629P-201ENST00000384061 103 ntBASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 AC127391.1-201ENST00000411737 98 ntBASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 AL031779.1-201ENST00000415663 330 ntBASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 DUTP6-201ENST00000425573 462 ntBASIC3.7□□□□□ -1.82
HDAC6Q9UBN7 ISCA1P6-201ENST00000427740 390 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms