Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 MTND4P13-201ENST00000402078 1023 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 SPA17P1-201ENST00000416656 452 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AL022400.1-201ENST00000423946 935 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC109583.1-201ENST00000432156 268 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 UBE2FP3-201ENST00000436366 524 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC010099.1-201ENST00000455434 375 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AL109741.2-201ENST00000455561 343 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 ATG12P2-201ENST00000456830 416 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 RPS27AP9-201ENST00000477681 438 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC096725.1-201ENST00000514266 313 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 RNU4-29P-201ENST00000515943 174 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 RN7SKP265-201ENST00000516448 223 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 DNAJC8P1-201ENST00000554535 372 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC009097.3-201ENST00000563557 1018 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 MTCO3P24-201ENST00000572729 782 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC013244.3-201ENST00000605614 388 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AP000240.1-201ENST00000609910 452 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC107871.2-201ENST00000612894 502 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC093838.1-201ENST00000613014 469 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AL607023.1-201ENST00000620045 248 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 AC092608.2-201ENST00000624427 218 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 OR5H6-203ENST00000642105 978 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 ASNSP3-201ENST00000451989 1306 ntBASIC2.38□□□□□ -2.03
CLCF1Q9UBD9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 RNU6-433P-201ENST00000363216 104 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 RNU6-799P-201ENST00000363567 107 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 CD24P4-201ENST00000382840 243 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 RNU6-253P-201ENST00000384730 105 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 RSL24D1P4-201ENST00000400938 484 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL139039.1-201ENST00000401900 692 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 TXNP7-201ENST00000406296 293 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL359704.1-201ENST00000411586 781 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL354941.1-201ENST00000438600 464 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 FAM103A2P-201ENST00000444122 354 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 RPL23AP20-201ENST00000447965 421 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 SNRPGP6-201ENST00000451124 220 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 RPS3P1-201ENST00000456781 192 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AP1S2P1-201ENST00000457344 379 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 KC877373.1-201ENST00000479066 408 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 MTND2P14-201ENST00000482139 351 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 ARL4AP2-201ENST00000507378 601 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 TTC39CP1-201ENST00000512513 755 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC110760.3-202ENST00000515177 371 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 RNU6-56P-201ENST00000516986 93 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AP004247.1-201ENST00000531556 1289 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC090888.2-201ENST00000559765 1144 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 MIR4999-201ENST00000585029 91 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 UBE2L4-201ENST00000587688 464 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 BNIP3P23-201ENST00000599655 511 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC234772.3-201ENST00000602277 528 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC021171.1-201ENST00000603137 706 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AC105148.1-201ENST00000604961 409 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL139344.1-201ENST00000605228 195 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 TUG1_2.1-201ENST00000614234 87 ntBASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCF1Q9UBD9 AL158801.5-201ENST00000623123 465 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms