Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SMARCAL1Q9NZC9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 Y_RNA.1-201ENST00000352915 104 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 SNORA20.2-201ENST00000383922 131 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 MIR19A-201ENST00000384878 82 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 RN7SKP27-201ENST00000410684 333 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC133104.1-201ENST00000429100 218 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC073464.1-201ENST00000429823 534 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 HMGN2P31-201ENST00000432430 273 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC002486.1-201ENST00000435098 391 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 TIMM9P1-201ENST00000436122 256 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 RBMX2P4-201ENST00000441256 376 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 TPT1P14-201ENST00000448018 505 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 MTND1P12-201ENST00000455231 147 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 snoU13.3-201ENST00000459441 104 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 MTCO3P38-201ENST00000468910 766 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC092989.1-201ENST00000481235 277 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 RPL23AP41-201ENST00000484754 458 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC007182.2-201ENST00000489251 402 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 RNA5SP217-201ENST00000515959 91 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 MTCYBP41-201ENST00000528913 1123 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL133271.1-201ENST00000538229 291 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AK6P1-201ENST00000540219 478 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 CR383656.7-201ENST00000548164 174 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 OR4K8P-201ENST00000578842 1048 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL391646.1-201ENST00000603860 190 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC011451.2-201ENST00000604303 598 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL162713.1-201ENST00000604480 262 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AL136363.1-201ENST00000605349 337 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC006133.1-201ENST00000617106 264 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 SNORD39.4-201ENST00000620099 78 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 AC244258.1-201ENST00000637553 1071 ntBASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMARCAL1Q9NZC9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-1249P-201ENST00000363237 111 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 Y_RNA.256-201ENST00000364594 104 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-1103P-201ENST00000384150 107 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 RPL21P3-201ENST00000395517 478 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AL583834.1-201ENST00000406943 343 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 BX323014.1-201ENST00000412876 237 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 OR1AA1P-201ENST00000419597 916 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 MTND4LP11-201ENST00000422184 280 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 MTND4P18-201ENST00000447010 465 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC027673.1-201ENST00000456245 405 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC146507.2-201ENST00000460608 476 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 RPL23AP55-201ENST00000498163 452 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC019235.1-201ENST00000503847 207 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 ARL4AP2-201ENST00000507378 601 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 PHBP14-201ENST00000512887 367 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC010493.1-201ENST00000513479 292 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 SNORA67.7-201ENST00000516664 135 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 RNA5SP337-201ENST00000517007 109 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC022616.3-201ENST00000523940 148 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AP001893.2-201ENST00000526949 202 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC126177.3-201ENST00000551839 688 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 U3.45-201ENST00000607547 219 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC006023.2-201ENST00000609916 167 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AC006338.1-201ENST00000618453 749 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 AL356585.4-201ENST00000623078 1229 ntBASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SMARCAL1Q9NZC9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms