Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TAAR7P-201ENST00000436141 242 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 HMGB1P12-201ENST00000438594 598 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 RNA5SP246-201ENST00000458909 119 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AC116533.1-201ENST00000459748 321 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 HMGN2P26-201ENST00000463169 339 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 RPL7P5-201ENST00000471472 736 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 RPS4XP13-201ENST00000483219 789 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 MTCO3P9-201ENST00000506989 781 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 RNU6-914P-201ENST00000516749 109 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 RNU7-143P-201ENST00000516781 65 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 NARSP2-201ENST00000518524 679 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 MIR3186-201ENST00000577404 85 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 MIR5583-1-201ENST00000580941 59 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 BNIP3P9-201ENST00000603714 553 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AC098826.3-201ENST00000603823 466 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 MIR15A-201ENST00000607334 83 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AC005183.1-201ENST00000603687 1979 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 AL672296.1-201ENST00000427780 2158 ntBASIC4.1□□□□□ -1.75
MKS1Q9NXB0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
MKS1Q9NXB0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 RNA5SP295-201ENST00000362655 121 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 RNU6-512P-201ENST00000364438 103 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 Y_RNA.534-201ENST00000384599 112 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 BX323014.1-201ENST00000412876 237 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 BX842559.1-201ENST00000419615 532 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AL160275.3-201ENST00000423876 471 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 RPEP3-201ENST00000425462 676 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AL590762.4-201ENST00000425885 253 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AL591704.1-201ENST00000432574 275 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 HSPD1P21-201ENST00000436541 245 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 RPL23AP46-201ENST00000438548 490 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC098614.3-201ENST00000438957 440 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC009237.8-201ENST00000445492 379 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AL513533.1-201ENST00000453728 415 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 HMGN2P16-201ENST00000456802 261 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 RPL37P6-201ENST00000460682 294 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 RN7SL98P-201ENST00000462271 300 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 TRBV1-201ENST00000476502 284 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AL160314.1-201ENST00000490836 438 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC114786.4-201ENST00000508771 728 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AP001804.3-201ENST00000525146 880 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 TRAV8-5-201ENST00000537369 341 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 AL161798.1-201ENST00000604630 131 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 MIR6730-201ENST00000622213 67 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 MTND1P37-201ENST00000636562 264 ntBASIC4.09□□□□□ -1.75
MKS1Q9NXB0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MKS1Q9NXB0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
MKS1Q9NXB0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
MKS1Q9NXB0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
MKS1Q9NXB0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 RNU6-741P-201ENST00000383889 107 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 MIR129-1-201ENST00000384972 72 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AL592114.1-201ENST00000403842 483 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 RNA5SP36-201ENST00000410197 133 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 RNU2-33P-201ENST00000410344 192 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 ARL5AP1-201ENST00000418991 388 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 YPEL5P1-201ENST00000419731 367 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 ARF4P2-201ENST00000430209 526 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.08□□□□□ -1.76
MKS1Q9NXB0 PMCHL2-203ENST00000457791 237 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 SCARNA18-201ENST00000459004 134 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 RPL7P19-201ENST00000469948 618 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC109327.1-201ENST00000471666 403 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC231760.1-201ENST00000498002 260 ntBASIC4.08□□□□□ -1.76
MKS1Q9NXB0 AC008628.2-201ENST00000502605 298 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms