Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MIR888-201ENST00000401186 77 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 UBE2FP1-201ENST00000416536 447 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 PAXBP1P1-201ENST00000449315 447 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 RBM43P1-201ENST00000476891 1081 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC104982.1-201ENST00000478775 574 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC011825.1-201ENST00000484967 388 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 RPS29P20-201ENST00000489592 171 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC135721.1-201ENST00000497954 479 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 HMGB3P3-201ENST00000510526 400 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC109445.1-201ENST00000512356 383 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC061975.8-201ENST00000587058 721 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AL357094.1-201ENST00000603845 844 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC007179.3-201ENST00000604976 235 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC006270.3-201ENST00000605967 1036 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC090186.1-201ENST00000605991 572 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC096577.2-201ENST00000611455 153 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AL138960.2-201ENST00000625145 535 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AC116618.1-201ENST00000634617 774 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 DDX43P2-201ENST00000604753 1354 ntBASIC2.19□□□□□ -2.06
CLN6Q9NWW5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.19□□□□□ -2.06
CLN6Q9NWW5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 RNU6-621P-201ENST00000364752 109 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 RPS4XP7-201ENST00000406274 780 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 NANOGP2-201ENST00000435391 727 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AL160314.1-201ENST00000490836 438 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC078814.3-201ENST00000553036 491 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AL356280.1-201ENST00000603614 379 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC135507.1-201ENST00000607214 561 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC067747.1-201ENST00000608026 250 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC245297.2-201ENST00000610119 565 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC109809.1-201ENST00000619665 545 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 AC068057.2-201ENST00000624047 895 ntBASIC2.18□□□□□ -2.06
CLN6Q9NWW5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLN6Q9NWW5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 MIR27B-201ENST00000385129 97 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 USP9YP27-201ENST00000418455 438 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AL389915.1-201ENST00000422463 466 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC092017.2-201ENST00000427600 362 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 MTCO1P53-201ENST00000441633 699 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AL358794.1-201ENST00000445689 381 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AP000936.2-201ENST00000447151 681 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC108729.1-201ENST00000487812 947 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 RPS15AP36-201ENST00000492022 382 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.17□□□□□ -2.06
CLN6Q9NWW5 NDUFB4P2-201ENST00000509515 391 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC079395.1-201ENST00000510981 262 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 RNU6-390P-201ENST00000516259 103 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 RNA5SP290-201ENST00000517133 127 ntBASIC2.17□□□□□ -2.06
CLN6Q9NWW5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms