Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 BMI1P1-201ENST00000445879 941 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 DDX3P2-201ENST00000446138 111 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 RPS15AP27-201ENST00000449183 343 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 SNORD121B-201ENST00000458838 81 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 SUMO2P6-201ENST00000505273 288 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC113155.1-201ENST00000511141 769 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC109445.1-201ENST00000512356 383 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC034159.1-201ENST00000513885 583 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 TRAV28-201ENST00000557548 323 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 MIR3117-201ENST00000584034 78 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 ATP1B3P1-201ENST00000605365 821 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC103710.4-201ENST00000609301 899 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AC093838.1-201ENST00000613014 469 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 AL603758.1-201ENST00000618654 241 ntBASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
EXOSC4Q9NPD3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-621P-201ENST00000364752 109 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RNU1-39P-201ENST00000383897 165 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-114P-201ENST00000384704 105 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 MIR514A1-201ENST00000385133 98 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AL139039.1-201ENST00000401900 692 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AL356421.1-201ENST00000403255 413 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 SNORA11.1-201ENST00000408133 129 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 ARL5AP4-201ENST00000430731 512 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 HSFY7P-201ENST00000432672 318 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 HSFY8P-201ENST00000437934 318 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC004854.1-201ENST00000440356 349 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 HSFY5P-201ENST00000453726 309 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 MTND4LP3-201ENST00000468320 276 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RPL23AP45-201ENST00000476406 468 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC097462.2-201ENST00000504623 481 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 HMGB3P3-201ENST00000510526 400 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC026801.2-201ENST00000515352 425 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RNA5SP471-201ENST00000516971 106 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AP003497.1-201ENST00000528472 562 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 GTF3AP2-201ENST00000557014 266 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 RPL23AP84-201ENST00000571193 464 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC005951.2-201ENST00000576282 495 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 MTCO2P2-201ENST00000591258 225 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC068313.1-201ENST00000604028 1008 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC005000.2-201ENST00000605468 310 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC009974.1-201ENST00000608881 455 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 AC245297.2-201ENST00000610119 565 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 MIR7106-201ENST00000612419 65 ntBASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC4Q9NPD3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 OR5J1P-201ENST00000313544 939 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 AL161781.1-201ENST00000354277 403 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-744P-201ENST00000365557 107 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 MTCYBP38-201ENST00000417160 1123 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 AC098614.2-201ENST00000426040 255 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 AL358075.3-201ENST00000426289 226 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.13□□□□□ -2.07
EXOSC4Q9NPD3 COX7BP2-201ENST00000437976 242 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms