Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CD248Q9HCU0 AL161670.1-201ENST00000554348 137 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 ZNF192P1-203ENST00000565888 810 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 OR4K8P-201ENST00000578842 1048 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 AC010201.1-201ENST00000605051 540 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD248Q9HCU0 U73479.1-201ENST00000618062 168 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 HSPA8P1-201ENST00000425843 1833 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.43□□□□□ -1.7
CD248Q9HCU0 AL122126.1-201ENST00000546905 1318 ntBASIC4.43□□□□□ -1.7
CD248Q9HCU0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CD248Q9HCU0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 Y_RNA.47-201ENST00000362697 108 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 Y_RNA.158-201ENST00000363651 101 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 RNU6-921P-201ENST00000384361 107 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 RNU6-1222P-201ENST00000384615 107 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AL356421.1-201ENST00000403255 413 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 HSPE1P26-201ENST00000405341 275 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 PPIAP31-201ENST00000405422 495 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AL606923.1-201ENST00000406616 190 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 RN7SKP158-201ENST00000410453 326 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AL133384.1-201ENST00000412744 351 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 RPL21P112-201ENST00000434403 463 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 HSFY6P-201ENST00000445573 403 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 Y_RNA.653-201ENST00000459091 95 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 U8.20-201ENST00000459445 131 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AP000893.1-201ENST00000474462 794 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC126389.1-201ENST00000477436 290 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 MTCYBP40-201ENST00000509390 1135 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 RNA5SP49-201ENST00000516450 115 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 RNU6-273P-201ENST00000516937 96 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AP001804.3-201ENST00000525146 880 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 MIR3942-201ENST00000585264 109 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC105224.1-201ENST00000587055 421 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 GLUD1P4-201ENST00000590914 418 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 NUTF2P8-201ENST00000604593 363 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC083806.3-201ENST00000614016 455 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AL161637.1-201ENST00000622380 412 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC048347.1-201ENST00000624621 427 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 Z69720.2-201ENST00000624755 279 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.42□□□□□ -1.7
CD248Q9HCU0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AC004972.1-201ENST00000623934 2209 ntBASIC4.42□□□□□ -1.7
CD248Q9HCU0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD248Q9HCU0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 SNORA7.2-201ENST00000364446 145 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 MIR607-201ENST00000385241 96 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 RPS23P10-201ENST00000416185 486 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AL356095.1-201ENST00000417217 199 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 RPL36AP36-201ENST00000418616 301 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 ARL5AP1-201ENST00000418991 388 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AC012065.2-201ENST00000421295 375 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 CYCSP43-201ENST00000438233 310 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AF228730.2-201ENST00000438784 848 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 TXNP1-201ENST00000441872 371 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AL359073.1-201ENST00000448036 403 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD248Q9HCU0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD248Q9HCU0 RPL30P15-201ENST00000457129 321 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 RPS27AP13-201ENST00000498403 237 ntBASIC4.41□□□□□ -1.7
CD248Q9HCU0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.41□□□□□ -1.7
CD248Q9HCU0 TXNP6-201ENST00000510190 310 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms