Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CDC42P1-201ENST00000456658 548 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 MTCYBP17-201ENST00000503579 789 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RNU5A-7P-201ENST00000515979 116 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-1095P-201ENST00000516148 108 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 MIR4498-201ENST00000577599 66 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 MIR502-201ENST00000606349 86 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 SDR42E1P2-201ENST00000614861 481 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 uc_338.20-201ENST00000621563 178 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 DUXAP9-208ENST00000622815 614 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 AC012640.5-201ENST00000623897 319 ntBASIC1.5□□□□□ -2.17
KIAA1549Q9HCM3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC016716.1-201ENST00000265882 708 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 RNU4-13P-201ENST00000364019 141 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 SNRPEP2-201ENST00000397592 279 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-321P-201ENST00000410912 106 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 BTF3P4-201ENST00000418852 495 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC024082.2-201ENST00000434771 238 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 GTF2IP7-202ENST00000436677 309 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 ZNF705CP-201ENST00000530515 889 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC095057.3-201ENST00000567102 1157 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 MIR3618-201ENST00000580330 88 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 MIR4658-201ENST00000584344 65 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.6-201ENST00000603753 252 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.11-201ENST00000604059 253 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.10-201ENST00000604330 253 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC008162.1-201ENST00000604718 254 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.1-201ENST00000604752 252 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.2-201ENST00000604983 252 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.5-201ENST00000605253 252 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.4-201ENST00000605279 254 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.12-201ENST00000605291 253 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.8-201ENST00000605353 252 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.9-201ENST00000605428 253 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AL670379.7-201ENST00000605823 252 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 BX248123.2-201ENST00000606318 124 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC079395.3-201ENST00000615161 484 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 MTCO1P18-201ENST00000455518 1419 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 AC009812.4-201ENST00000569134 1805 ntBASIC1.49□□□□□ -2.17
KIAA1549Q9HCM3 SNORD48-201ENST00000364953 64 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 RNU6-14P-201ENST00000384630 106 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 BEND7P1-201ENST00000422058 457 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 RPS15AP27-201ENST00000449183 343 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 PPP1R2P5-201ENST00000457256 603 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 RPS27P23-201ENST00000487608 251 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC090096.1-201ENST00000489168 390 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC022447.3-201ENST00000506865 495 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC078899.2-201ENST00000595282 212 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 OR1S1-201ENST00000624470 978 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 NUP58P1-201ENST00000502546 1738 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 ZNF876P-202ENST00000398732 1485 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 DEFB108F-201ENST00000344638 222 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 RNU2-40P-201ENST00000410833 196 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 BX510359.4-201ENST00000423750 193 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC079780.1-201ENST00000428259 207 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 UBE2V2P3-201ENST00000433562 437 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 RNA5SP233-201ENST00000459153 113 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC093767.1-201ENST00000504523 156 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC104108.1-201ENST00000509930 412 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 RNU1-104P-201ENST00000517280 175 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 HIGD1AP6-201ENST00000521833 279 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 DEFB108D-201ENST00000527787 222 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 HMGB1P14-201ENST00000557424 591 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 AC098679.5-201ENST00000624394 571 ntBASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.48□□□□□ -2.17
KIAA1549Q9HCM3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 SNORA16.1-201ENST00000364597 132 ntBASIC1.47□□□□□ -2.17
KIAA1549Q9HCM3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms