Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL353997.4-201ENST00000586196 166 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AL158211.4-201ENST00000606988 584 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AC144521.1-201ENST00000607148 956 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AP000254.1-201ENST00000609934 520 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 CR381653.2-201ENST00000624041 768 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AC079228.1-201ENST00000624774 1049 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 DDX43P2-201ENST00000604753 1354 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AC011477.1-204ENST00000623416 1325 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL161781.1-201ENST00000354277 403 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 RNA5SP393-201ENST00000363423 117 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 RNU6-76P-201ENST00000384060 104 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 RNA5SP354-201ENST00000391247 136 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 RNU6-584P-201ENST00000410350 95 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC084290.1-201ENST00000434995 374 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL121890.1-201ENST00000435457 205 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC090774.1-201ENST00000435925 246 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL513124.1-201ENST00000450410 614 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 CACYBPP2-201ENST00000453625 678 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL049714.1-201ENST00000466686 347 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 RPL7P18-201ENST00000478965 734 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL049874.1-201ENST00000489560 388 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC104090.1-201ENST00000506341 1171 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 TPT1P8-201ENST00000510120 555 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 CDC42P4-201ENST00000510507 563 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL359273.1-201ENST00000510918 627 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 SNORA31.22-201ENST00000517204 135 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 CASP1P1-201ENST00000526345 212 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC009163.5-201ENST00000575421 637 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC011260.1-201ENST00000578420 472 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 MIR4446-201ENST00000578505 67 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC004067.1-201ENST00000608733 700 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC097478.2-201ENST00000610572 514 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AC034102.8-201ENST00000615146 484 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 MIR6130-201ENST00000619419 109 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 AP000484.1-201ENST00000620067 1252 ntBASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.94□□□□□ -1.94
RPAP3Q9H6T3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 RNU6-97P-201ENST00000363387 104 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 RNU1-105P-201ENST00000363470 161 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 RNU6-757P-201ENST00000410334 100 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 USP9YP10-201ENST00000454868 628 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 MTND5P4-201ENST00000514978 288 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 AC025881.1-201ENST00000518851 512 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 AP000857.1-201ENST00000532151 543 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 MIR3921-201ENST00000577308 85 ntBASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPAP3Q9H6T3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 AC008568.2-201ENST00000623862 2313 ntBASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 ZNF658B-202ENST00000615961 3375 ntBASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 RNU6-359P-201ENST00000365466 108 ntBASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 RNU1-138P-201ENST00000384093 164 ntBASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 AL356421.1-201ENST00000403255 413 ntBASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 RPL7L1P10-201ENST00000427790 463 ntBASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.92□□□□□ -1.94
RPAP3Q9H6T3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms