Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 VN1R80P-201ENST00000597126 338 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC115621.1-201ENST00000604653 858 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 C2orf27A-204ENST00000623058 969 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC092447.10-201ENST00000620607 1652 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AL049780.3-201ENST00000624612 1583 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC032011.1-201ENST00000611703 1549 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.67-201ENST00000362870 100 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.166-201ENST00000363730 102 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RNU6-1322P-201ENST00000364309 107 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.481-201ENST00000384373 102 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RPS4XP8-201ENST00000402039 771 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL122016.1-201ENST00000403365 367 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RNU6-1068P-201ENST00000410958 103 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RNU6-1148P-201ENST00000410992 104 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC012065.2-201ENST00000421295 375 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 MTCO2P12-201ENST00000427426 682 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 FTH1P6-201ENST00000430768 320 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RPL22P17-201ENST00000438729 315 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 MRPL50P4-201ENST00000446432 475 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC140076.1-201ENST00000449897 361 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC005297.2-201ENST00000450430 606 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RNU7-170P-201ENST00000459303 61 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC025518.1-201ENST00000479856 347 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC068305.1-201ENST00000497406 726 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 TXNP6-201ENST00000510190 310 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC093677.1-201ENST00000514414 678 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC016065.2-201ENST00000514530 444 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC112206.3-201ENST00000514578 389 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RNU6-201P-201ENST00000517100 61 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC022690.1-201ENST00000526681 550 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC092470.1-201ENST00000546187 132 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 NCAPGP2-201ENST00000557911 754 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC055876.1-202ENST00000567053 138 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL355375.2-201ENST00000574825 175 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 MIR4458-201ENST00000578872 75 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 MIR4738-201ENST00000579134 87 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC013553.2-201ENST00000604244 589 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AP000942.4-201ENST00000604811 241 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL121655.1-201ENST00000605811 308 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL355365.1-201ENST00000616480 294 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC024940.5-201ENST00000622889 474 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 AC138649.5-201ENST00000637456 137 ntBASIC3.72□□□□□ -1.81
EBF3Q9H4W6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
EBF3Q9H4W6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AL161781.1-201ENST00000354277 403 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RNU5E-1-201ENST00000362477 120 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 RNA5SP118-201ENST00000410385 109 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 OR51AB1P-201ENST00000429046 620 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 ATP5JP1-201ENST00000431631 322 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AL606489.2-201ENST00000433886 234 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 AC024082.2-201ENST00000434771 238 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 USP9YP15-201ENST00000442391 422 ntBASIC3.71□□□□□ -1.82
EBF3Q9H4W6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms