Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC055855.1-201ENST00000489563 579 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC138853.1-201ENST00000503549 823 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC026427.2-201ENST00000506228 536 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 OR5BM1P-201ENST00000512021 366 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC110760.3-202ENST00000515177 371 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 SNORA74D-201ENST00000516404 141 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 RN7SKP57-201ENST00000517248 293 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 MRPS36P3-201ENST00000519284 130 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC004486.1-201ENST00000546846 233 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC012493.2-201ENST00000595083 291 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC136601.2-201ENST00000604356 474 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AL161756.2-201ENST00000604597 246 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC105148.1-201ENST00000604961 409 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC007038.2-201ENST00000608095 740 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC004852.3-201ENST00000614131 326 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 MIR8057-201ENST00000620957 69 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 AC097655.1-201ENST00000635075 318 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 CCT4P2-201ENST00000233836 1548 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DDX47Q9H0S4 MTND4P16-201ENST00000466108 1367 ntBASIC2.86□□□□□ -1.95
DDX47Q9H0S4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 FTLP6-201ENST00000355274 422 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 Y_RNA.302-201ENST00000364997 102 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 SNORD21-201ENST00000383953 95 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 SNORA9-201ENST00000384215 133 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RNU6-140P-201ENST00000384566 108 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 MIR592-201ENST00000384959 97 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 SNORA48.5-201ENST00000391143 135 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RPL21P75-201ENST00000396599 483 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RPL21P28-201ENST00000401418 483 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AL592114.1-201ENST00000403842 483 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 CCNG1P1-201ENST00000406783 885 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 HMGB1P11-201ENST00000413899 637 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC009414.1-201ENST00000427200 443 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AL512649.1-201ENST00000428997 581 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 MTATP6P30-201ENST00000443540 664 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 MTCYBP3-201ENST00000445588 1137 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 ELOCP30-201ENST00000447108 299 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 WASF1P1-201ENST00000447560 1131 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RNU7-59P-201ENST00000459101 61 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RPL21P39-201ENST00000463605 483 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC010631.1-201ENST00000474150 156 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RPL21P93-201ENST00000480465 489 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC087190.1-201ENST00000484462 480 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC093591.1-201ENST00000491435 481 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RPL21P16-201ENST00000495531 483 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 LTV1P1-201ENST00000510683 1237 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 RNU6-390P-201ENST00000516259 103 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC123904.3-201ENST00000547218 814 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AL391261.3-201ENST00000557194 520 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 MIR4999-201ENST00000585029 91 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC006539.2-201ENST00000601729 572 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC096644.4-201ENST00000563417 2912 ntBASIC2.85□□□□□ -1.95
DDX47Q9H0S4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX47Q9H0S4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX47Q9H0S4 AC006378.2-201ENST00000623178 2476 ntBASIC2.84□□□□□ -1.95
DDX47Q9H0S4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DDX47Q9H0S4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
DDX47Q9H0S4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX47Q9H0S4 USP9YP26-201ENST00000421008 661 ntBASIC2.84□□□□□ -1.95
DDX47Q9H0S4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX47Q9H0S4 USP12PX-201ENST00000432383 1057 ntBASIC2.84□□□□□ -1.95
DDX47Q9H0S4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX47Q9H0S4 RPL7P36-201ENST00000444633 681 ntBASIC2.84□□□□□ -1.95
DDX47Q9H0S4 AC020550.1-201ENST00000447385 163 ntBASIC2.84□□□□□ -1.95
DDX47Q9H0S4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms