Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC008269.2-201ENST00000561915 1105 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 MIR3200-201ENST00000580767 85 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AC104662.1-201ENST00000604448 511 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AC012409.4-201ENST00000612923 249 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AL138721.1-201ENST00000616756 179 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 U6.105-201ENST00000637379 88 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AC103710.2-202ENST00000641454 2853 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AL672167.1-203ENST00000641299 2975 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 AL049641.1-201ENST00000441055 1948 ntBASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CNTNAP4Q9C0A0 MAPK10-303ENST00000641324 3959 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.176-201ENST00000363815 109 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.307-201ENST00000365022 117 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD82-201ENST00000365530 70 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 RNU5E-6P-201ENST00000365574 115 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 SNORA63.7-201ENST00000365579 123 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1040P-201ENST00000383974 107 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD96B-201ENST00000386148 79 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 SNORA3.3-201ENST00000408712 125 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 SKA2P1-201ENST00000425592 390 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 HMGB3P11-201ENST00000440127 604 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 PRDX3P3-201ENST00000447765 522 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AL133162.1-201ENST00000463228 453 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC004801.2-202ENST00000463559 283 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 HMGB1P30-201ENST00000492455 606 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC087369.1-201ENST00000520775 996 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 MTCO3P23-201ENST00000561363 289 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AL160281.1-201ENST00000605307 311 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 MIR432-201ENST00000606207 94 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC012603.1-201ENST00000606424 528 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC103705.1-201ENST00000619013 241 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-156P-201ENST00000621869 107 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC025034.2-201ENST00000623264 286 ntBASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CNTNAP4Q9C0A0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC032011.1-201ENST00000611703 1549 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.5-201ENST00000362334 102 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1287P-201ENST00000362914 107 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD35B-201ENST00000363660 87 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.188-201ENST00000363952 111 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.252-201ENST00000364556 101 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNA5SP97-201ENST00000365006 84 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.476-201ENST00000384347 108 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-601P-201ENST00000384540 107 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1060P-201ENST00000384664 107 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 MIR491-201ENST00000384877 84 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-328P-201ENST00000390887 106 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU2-15P-201ENST00000410692 191 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 MCFD2P1-201ENST00000417812 300 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RPL23AP89-201ENST00000439324 255 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 MRPS31P2-201ENST00000451581 518 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 MTCO3P10-201ENST00000455912 772 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 U8.20-201ENST00000459445 131 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 PPIAP15-201ENST00000479662 484 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-406P-201ENST00000516470 107 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1038P-201ENST00000516516 104 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-273P-201ENST00000516937 96 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 FAM60DP-201ENST00000524174 632 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AP002404.1-201ENST00000532005 451 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC092470.1-201ENST00000546187 132 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC138761.3-201ENST00000579993 334 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms