Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC005005.2-201ENST00000420779 380 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AL358075.3-201ENST00000426289 226 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 ARF4P4-201ENST00000439608 520 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 RAC1P7-201ENST00000445367 377 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AL136380.1-201ENST00000447970 162 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM4Q9C037 USP9YP34-201ENST00000453983 808 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC104164.3-201ENST00000467363 1258 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC068781.1-201ENST00000488231 618 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 RPL23AP63-201ENST00000498752 471 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM4Q9C037 MTCYBP17-201ENST00000503579 789 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 NDUFA5P6-201ENST00000542110 379 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC068135.2-201ENST00000569293 1028 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC009314.1-201ENST00000603871 304 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 BNIP3P4-201ENST00000604946 565 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 BX322635.1-201ENST00000605804 496 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC097504.2-201ENST00000608088 454 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM4Q9C037 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TRIM4Q9C037 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM4Q9C037 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 RPL35AP22-201ENST00000436855 335 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC092155.2-201ENST00000454675 477 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 ATG12P2-201ENST00000456830 416 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 AL049714.1-201ENST00000466686 347 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 HMGB3P17-201ENST00000504195 649 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 TRMT112P2-201ENST00000512910 132 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 LRRC37A5P-203ENST00000580181 585 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM4Q9C037 AL627230.6-201ENST00000611129 280 ntBASIC2.01□□□□□ -2.09
TRIM4Q9C037 AC027514.1-201ENST00000588561 1603 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 NPM1P10-201ENST00000398310 865 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 RNU6-1140P-201ENST00000410517 106 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 RNU6-77P-201ENST00000410554 91 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2□□□□□ -2.09
TRIM4Q9C037 AL353729.1-201ENST00000425044 720 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 Z82205.1-201ENST00000428456 297 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2□□□□□ -2.09
TRIM4Q9C037 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TRIM4Q9C037 RNU7-23P-201ENST00000459465 62 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 MTND4LP3-201ENST00000468320 276 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AL163540.1-201ENST00000485382 386 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AC108078.2-201ENST00000510750 236 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRIM4Q9C037 ZNF705CP-201ENST00000530515 889 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRIM4Q9C037 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2□□□□□ -2.09
TRIM4Q9C037 AL020997.3-201ENST00000602843 359 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AP001521.1-201ENST00000609150 300 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AC103710.4-201ENST00000609301 899 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2□□□□□ -2.09
TRIM4Q9C037 AC131280.1-202ENST00000624067 4211 ntBASIC2□□□□□ -2.09
TRIM4Q9C037 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TRIM4Q9C037 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 RNY1P10-201ENST00000363268 113 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 RN7SKP226-201ENST00000364912 300 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 SNORA40.18-201ENST00000391200 128 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 CIR1P3-201ENST00000405137 479 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 SDCBPP1-201ENST00000440192 890 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 FGF7P5-201ENST00000441829 291 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 OSTCP8-201ENST00000445117 448 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 RNU6-420P-201ENST00000458780 107 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC107626.1-201ENST00000471084 183 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM4Q9C037 AL359273.1-201ENST00000510918 627 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 HMGB1P1-201ENST00000522557 636 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 IGJP1-201ENST00000522682 475 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 OR5AK1P-201ENST00000524837 922 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC012414.2-201ENST00000559474 187 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AL049838.1-201ENST00000563647 981 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC013444.2-201ENST00000603317 787 ntBASIC1.99□□□□□ -2.09
TRIM4Q9C037 AC002487.1-201ENST00000604565 994 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms