Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL513043.1-201ENST00000439124 535 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AC007395.1-201ENST00000451333 677 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AC010733.1-201ENST00000451515 401 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RN7SKP210-201ENST00000459176 261 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RNU6-1037P-201ENST00000459571 107 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RN7SL303P-201ENST00000469773 251 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AP001025.1-201ENST00000486139 332 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RN7SKP60-201ENST00000516985 239 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AP005660.1-201ENST00000522972 293 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 PRPF19P1-201ENST00000584766 898 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AC067852.3-201ENST00000589177 561 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 AC009318.2-201ENST00000610917 651 ntBASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL25A1Q9BXS0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AL031119.1-201ENST00000404707 1879 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 SPRR2C-201ENST00000290702 219 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AC019155.1-201ENST00000382242 574 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 SNORA12.2-201ENST00000391040 156 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 RNU6-607P-201ENST00000411283 108 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 CYCSP33-201ENST00000414485 327 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AL358453.1-201ENST00000422522 250 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 GOT2P5-201ENST00000433995 546 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 RPL26P6-201ENST00000440913 438 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AL360271.2-201ENST00000447710 161 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 RNU7-87P-201ENST00000459343 62 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AC091959.1-201ENST00000495857 238 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 RPL23AP94-201ENST00000512518 302 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 MIR548X2-201ENST00000579776 100 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 MIR4513-201ENST00000581077 86 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 TUG1_2.1-201ENST00000614234 87 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 ZNF826P-207ENST00000622273 1910 ntBASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.2□□□□□ -1.58
COL25A1Q9BXS0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AC005618.1-201ENST00000606901 3148 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 RNU6-312P-201ENST00000364629 107 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.262-201ENST00000364641 102 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 RNA5SP90-201ENST00000364801 99 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.331-201ENST00000365267 102 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 RNU6-14P-201ENST00000384630 106 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 MIR7-3-201ENST00000384898 110 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 MTATP6P4-201ENST00000427725 675 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AC004938.1-201ENST00000438468 308 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AC127537.2-201ENST00000439258 465 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 SNORA27.4-201ENST00000516650 95 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 RNU6-352P-201ENST00000516908 107 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AC027369.5-201ENST00000533838 755 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 TGIF1P1-201ENST00000558095 802 ntBASIC5.19□□□□□ -1.58
COL25A1Q9BXS0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms