Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AL606489.2-201ENST00000433886 234 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AL121877.1-201ENST00000453704 622 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AL591473.1-201ENST00000464297 313 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC010631.1-201ENST00000474150 156 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC108860.1-201ENST00000484521 383 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 HMGB1P41-201ENST00000520234 440 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC005868.1-201ENST00000536421 331 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AC007687.1-201ENST00000602704 304 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 AP002826.1-201ENST00000608835 315 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 MIR1302-1-201ENST00000637932 143 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 USP8P1-201ENST00000494673 3183 ntBASIC4.16□□□□□ -1.74
LRFN3Q9BTN0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LRFN3Q9BTN0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
LRFN3Q9BTN0 AC126323.6-202ENST00000568092 3511 ntBASIC4.15□□□□□ -1.74
LRFN3Q9BTN0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LRFN3Q9BTN0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
LRFN3Q9BTN0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.15□□□□□ -1.74
LRFN3Q9BTN0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RNU5A-1-201ENST00000362698 116 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 Y_RNA.132-201ENST00000363421 102 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 SNORA69-201ENST00000383895 132 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RNU6-641P-201ENST00000384006 107 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RNU6-606P-201ENST00000384721 111 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 UBA52P6-201ENST00000399822 382 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 SNORA3.3-201ENST00000408712 125 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RNU6-373P-201ENST00000411247 98 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC007738.1-201ENST00000413892 348 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RPL26P6-201ENST00000440913 438 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC126389.1-201ENST00000477436 290 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AL359273.1-201ENST00000510918 627 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 SNORA19.2-201ENST00000516013 114 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 SNORA31.8-201ENST00000516327 108 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RNU7-30P-201ENST00000516835 62 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RNU6-1092P-201ENST00000516955 87 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 SNORA31.22-201ENST00000517204 135 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 RPL23AP53-201ENST00000521854 457 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 OR5B19P-201ENST00000531766 928 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 Z98200.1-201ENST00000607298 470 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 DISC2.1-201ENST00000612827 205 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 MTND5P42-201ENST00000637720 498 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 AC100810.6-201ENST00000638068 285 ntBASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.15□□□□□ -1.75
LRFN3Q9BTN0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 XIAPP3-201ENST00000312918 795 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AL031121.1-201ENST00000406553 254 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RN7SKP32-201ENST00000410167 303 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RNA5SP120-201ENST00000410900 112 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RPL35AP12-201ENST00000425362 338 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 MTCO3P46-201ENST00000425787 232 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC079780.1-201ENST00000428259 207 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RPL36AP53-201ENST00000432891 316 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RPL7P12-201ENST00000446719 750 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RNU6-261P-201ENST00000459506 102 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 HSPE1P6-201ENST00000479457 291 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC092451.1-201ENST00000480211 153 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC103851.1-201ENST00000506833 274 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RN7SKP46-201ENST00000515942 234 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC008489.1-201ENST00000524271 483 ntBASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.14□□□□□ -1.75
LRFN3Q9BTN0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms