Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 RNA5SP289-201ENST00000362332 137 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AL589655.1-201ENST00000405398 482 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AL109913.1-201ENST00000421173 514 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 PGBD4P6-201ENST00000421501 610 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC241584.1-201ENST00000438469 1241 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC093155.1-201ENST00000440164 826 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC092170.1-201ENST00000440211 356 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 MTCO3P11-201ENST00000455103 774 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 ATG12P2-201ENST00000456830 416 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 MTCO1P42-201ENST00000457379 726 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC026801.1-201ENST00000497178 464 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC084024.2-201ENST00000503480 791 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 COX7A2P2-201ENST00000505291 250 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC124947.2-202ENST00000552735 133 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC007375.1-201ENST00000554513 578 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 DEFB122-202ENST00000569013 197 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC024614.2-201ENST00000577584 372 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 MIR4299-201ENST00000577899 72 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 HMGN2P15-201ENST00000585707 270 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AL589743.7-201ENST00000612637 233 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC008498.1-201ENST00000613012 531 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC005296.1-201ENST00000616145 209 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC110994.2-201ENST00000635481 492 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LIMD2Q9BT23 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 RNU4-82P-201ENST00000362443 140 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 MIR514A1-201ENST00000385133 98 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 RSL24D1P4-201ENST00000400938 484 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL512604.1-201ENST00000404812 257 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 EIF1AXP1-201ENST00000419267 435 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC093106.2-201ENST00000428212 385 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 UBE2D3P1-201ENST00000436669 444 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 Z82210.1-201ENST00000440037 231 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL050341.1-201ENST00000447743 313 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL500527.1-201ENST00000448532 255 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL118520.1-201ENST00000450770 291 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 RPL23AP3-201ENST00000453844 468 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 RPL32P14-201ENST00000463196 378 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC092757.1-201ENST00000467293 467 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC011352.3-201ENST00000505162 593 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC098591.2-201ENST00000510152 315 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 LTV1P1-201ENST00000510683 1237 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 SCARNA3-201ENST00000517097 143 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL133241.1-201ENST00000556832 487 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC008121.1-201ENST00000603244 268 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC007349.4-201ENST00000608114 532 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 TUG1_1.1-201ENST00000610654 145 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL590099.1-201ENST00000615276 138 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 U4atac.1-201ENST00000618345 95 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL590808.1-201ENST00000618696 141 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AC064859.1-201ENST00000624741 174 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.17□□□□□ -2.22
LIMD2Q9BT23 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LIMD2Q9BT23 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
LIMD2Q9BT23 AC006020.1-201ENST00000420179 1854 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 ZNF355P-201ENST00000427301 3216 ntBASIC1.16□□□□□ -2.22
LIMD2Q9BT23 RNA5SP276-201ENST00000362580 94 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms