Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MIR490-201ENST00000384865 128 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 U3.39-201ENST00000408569 239 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.82□□□□□ -1.96
SSX3Q99909 ELOCP17-201ENST00000414751 326 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.82□□□□□ -1.96
SSX3Q99909 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX3Q99909 ISCA1P2-201ENST00000438679 421 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AL445567.1-201ENST00000439121 144 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX3Q99909 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.82□□□□□ -1.96
SSX3Q99909 AL590365.1-201ENST00000450788 243 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 RBMY2UP-201ENST00000453474 324 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 HMGN1P18-201ENST00000457642 277 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 RPS20P22-201ENST00000473700 357 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.82□□□□□ -1.96
SSX3Q99909 AC138853.1-201ENST00000503549 823 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC104027.1-201ENST00000521887 300 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC128657.1-201ENST00000549459 145 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 NCAPGP2-201ENST00000557911 754 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.82□□□□□ -1.96
SSX3Q99909 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.82□□□□□ -1.96
SSX3Q99909 MIR3146-201ENST00000580367 79 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC083760.1-201ENST00000589621 670 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AL022161.1-201ENST00000604390 213 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC008277.2-201ENST00000605196 797 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC092354.1-201ENST00000606057 376 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.82□□□□□ -1.96
SSX3Q99909 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC022149.2-201ENST00000621061 203 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC091931.1-201ENST00000623488 728 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 AC019226.2-201ENST00000625973 424 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.82□□□□□ -1.96
SSX3Q99909 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.82□□□□□ -1.96
SSX3Q99909 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SSX3Q99909 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SSX3Q99909 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SSX3Q99909 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSX3Q99909 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SSX3Q99909 MFSD8-233ENST00000641482 4860 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 Y_RNA.333-201ENST00000365274 102 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX3Q99909 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.81□□□□□ -1.96
SSX3Q99909 AL359634.1-202ENST00000404721 284 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSX3Q99909 RPL17P12-201ENST00000413391 526 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC092047.1-201ENST00000424997 240 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC097713.2-201ENST00000430199 356 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 ATP5JP1-201ENST00000431631 322 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC020550.1-201ENST00000447385 163 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC097262.1-201ENST00000452559 548 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC087588.1-201ENST00000462203 316 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 RPL23AP67-201ENST00000465341 474 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.81□□□□□ -1.96
SSX3Q99909 RPL27AP5-201ENST00000469428 449 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX3Q99909 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX3Q99909 MTND5P13-201ENST00000513046 1079 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC114797.1-201ENST00000514003 728 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC022616.6-201ENST00000520479 119 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.81□□□□□ -1.96
SSX3Q99909 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC109446.2-201ENST00000567872 497 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 MIR5697-201ENST00000578045 78 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 MIR4293-201ENST00000584305 78 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.81□□□□□ -1.96
SSX3Q99909 AL137843.1-201ENST00000605078 385 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AL391813.2-201ENST00000609113 322 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC012360.2-201ENST00000609349 391 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AC108747.1-201ENST00000609508 535 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AL359198.2-201ENST00000611836 194 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.81□□□□□ -1.96
SSX3Q99909 AC008147.4-201ENST00000617570 1204 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 LRRC77P-213ENST00000637727 880 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SSX3Q99909 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSX3Q99909 AC026241.1-201ENST00000517873 2142 ntBASIC2.81□□□□□ -1.96
SSX3Q99909 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSX3Q99909 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX3Q99909 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SSX3Q99909 MTND5P1-201ENST00000445440 1375 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSX3Q99909 RNU5E-5P-201ENST00000365379 116 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 RNY3P13-201ENST00000365542 102 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 SNORD17-201ENST00000390930 237 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 SNORD115.1-201ENST00000391109 76 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 RNU2-62P-201ENST00000410868 191 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.8□□□□□ -1.96
SSX3Q99909 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.8□□□□□ -1.96
SSX3Q99909 USP9YP13-201ENST00000417797 480 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.8□□□□□ -1.96
SSX3Q99909 AC244035.1-201ENST00000430042 390 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms