Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 NUP35P1-201ENST00000422734 947 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.28□□□□□ -1.88
RAD9AQ99638 COX6CP2-201ENST00000444980 225 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RAD9AQ99638 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.28□□□□□ -1.88
RAD9AQ99638 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 MTND5P13-201ENST00000513046 1079 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AL391156.1-201ENST00000554965 554 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 MED28P6-201ENST00000558776 231 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 AP005136.1-201ENST00000579765 429 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 AC138761.3-201ENST00000579993 334 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.28□□□□□ -1.88
RAD9AQ99638 ATP1B3P1-201ENST00000605365 821 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.28□□□□□ -1.88
RAD9AQ99638 AL158063.1-201ENST00000615349 536 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 AL450472.3-201ENST00000615578 367 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 MIR4275-201ENST00000636486 87 ntBASIC3.28□□□□□ -1.88
RAD9AQ99638 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAD9AQ99638 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RAD9AQ99638 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RAD9AQ99638 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
RAD9AQ99638 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
RAD9AQ99638 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAD9AQ99638 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAD9AQ99638 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAD9AQ99638 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.27□□□□□ -1.89
RAD9AQ99638 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.27□□□□□ -1.89
RAD9AQ99638 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
RAD9AQ99638 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC062016.1-201ENST00000355719 319 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 RNU5E-5P-201ENST00000365379 116 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RAD9AQ99638 RNU6-754P-201ENST00000391166 107 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 RPS4XP8-201ENST00000402039 771 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 RPS3AP24-201ENST00000407896 734 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AL645937.1-202ENST00000421799 937 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 RPL7P46-201ENST00000425129 740 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 MTATP6P4-201ENST00000427725 675 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 DPPA2P1-201ENST00000428060 556 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC024082.2-201ENST00000434771 238 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AC090774.1-201ENST00000435925 246 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 RPL35AP22-201ENST00000436855 335 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 KATNBL1P3-201ENST00000443475 909 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC108938.1-201ENST00000451204 136 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 SNRPGP9-201ENST00000456025 225 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.27□□□□□ -1.89
RAD9AQ99638 HIGD1AP13-201ENST00000509878 289 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.27□□□□□ -1.89
RAD9AQ99638 SCGB1D5P-201ENST00000515134 247 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 MIR2276-201ENST00000516886 89 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 RNU6-1003P-201ENST00000517099 105 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 HMGN1P28-201ENST00000521340 364 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC012414.6-201ENST00000568241 401 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 HMGB1P6-201ENST00000569046 646 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 MIR5697-201ENST00000578045 78 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 MIR548AB-201ENST00000584917 84 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AL358072.1-201ENST00000604156 575 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AC080013.6-201ENST00000606185 215 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AC135507.1-201ENST00000607214 561 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC025048.6-202ENST00000627667 438 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 AC010149.2-201ENST00000637608 315 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
RAD9AQ99638 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RAD9AQ99638 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
RAD9AQ99638 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAD9AQ99638 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RAD9AQ99638 Y_RNA.77-201ENST00000362962 107 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 RNU6-533P-201ENST00000384144 107 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 RNU6-516P-201ENST00000411381 104 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 RPL21P32-201ENST00000419877 477 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.26□□□□□ -1.89
RAD9AQ99638 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.26□□□□□ -1.89
RAD9AQ99638 UBE2D3P2-201ENST00000424409 445 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 MTND4P32-201ENST00000437189 1237 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAD9AQ99638 AL109933.2-201ENST00000452651 260 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.26□□□□□ -1.89
RAD9AQ99638 RPS27P29-201ENST00000463110 252 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 AC117440.1-201ENST00000474107 571 ntBASIC3.26□□□□□ -1.89
RAD9AQ99638 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms