Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RPL31P58-201ENST00000469001 379 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 SNORD116-26-201ENST00000516006 96 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.88□□□□□ -2.27
SPENQ96T58 AC083899.3-201ENST00000603413 594 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC068620.4-201ENST00000636730 1182 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.88□□□□□ -2.27
SPENQ96T58 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SPENQ96T58 AC016691.1-201ENST00000441321 413 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.88□□□□□ -2.27
SPENQ96T58 AC092140.2-201ENST00000618027 521 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SPENQ96T58 AC015922.2-201ENST00000435593 184 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 SNORD108-201ENST00000459332 71 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.87□□□□□ -2.27
SPENQ96T58 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC0.87□□□□□ -2.27
SPENQ96T58 OR5AQ1P-201ENST00000527596 927 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 APOOP3-201ENST00000536787 586 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.87□□□□□ -2.27
SPENQ96T58 AC099654.7-201ENST00000635788 2127 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 RNA5SP193-201ENST00000410353 107 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 RNA5SP233-201ENST00000459153 113 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.87□□□□□ -2.27
SPENQ96T58 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.87□□□□□ -2.27
SPENQ96T58 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.87□□□□□ -2.27
SPENQ96T58 BX322635.1-201ENST00000605804 496 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 AC008669.1-201ENST00000565823 2178 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 RNU1-101P-201ENST00000391171 127 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 AC019070.1-201ENST00000415008 1024 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 FCF1P2-201ENST00000415284 583 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.87□□□□□ -2.27
SPENQ96T58 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.87□□□□□ -2.27
SPENQ96T58 AK3P2-201ENST00000507976 429 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 AC010200.2-201ENST00000605098 235 ntBASIC0.87□□□□□ -2.27
SPENQ96T58 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.86□□□□□ -2.27
SPENQ96T58 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.86□□□□□ -2.27
SPENQ96T58 DUXAP4-201ENST00000603046 613 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AC138473.1-201ENST00000605717 526 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 Y_RNA.48-201ENST00000362710 103 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 RPL27AP8-201ENST00000424277 446 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 ARL5AP2-201ENST00000444698 533 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AL360221.1-201ENST00000445989 335 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AL136380.1-201ENST00000447970 162 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AC104806.1-201ENST00000508720 308 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 RNU6-1334P-201ENST00000516032 105 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 RNU1-104P-201ENST00000517280 175 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.86□□□□□ -2.27
SPENQ96T58 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SPENQ96T58 AC090425.2-201ENST00000608818 501 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AC004808.1-201ENST00000627671 721 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
SPENQ96T58 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SPENQ96T58 SSXP10-201ENST00000402595 565 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AC022493.1-201ENST00000492984 337 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.86□□□□□ -2.27
SPENQ96T58 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.86□□□□□ -2.27
SPENQ96T58 OR6C7P-201ENST00000547875 934 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 AC005034.5-201ENST00000604219 466 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 SNORD114-21-201ENST00000606412 72 ntBASIC0.86□□□□□ -2.27
SPENQ96T58 MIR124-3-201ENST00000384866 87 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.85□□□□□ -2.27
SPENQ96T58 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.85□□□□□ -2.27
SPENQ96T58 MIR4723-201ENST00000585070 81 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 ZNF37BP-203ENST00000452306 1352 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SPENQ96T58 RNU1-109P-201ENST00000383960 147 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 HMGB3P30-201ENST00000457863 606 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.85□□□□□ -2.27
SPENQ96T58 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.85□□□□□ -2.27
SPENQ96T58 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.85□□□□□ -2.27
SPENQ96T58 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 HSPE1P14-201ENST00000605812 302 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.85□□□□□ -2.27
SPENQ96T58 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
SPENQ96T58 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SPENQ96T58 ZNF965P-201ENST00000432501 817 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.85□□□□□ -2.27
SPENQ96T58 ATG12P2-201ENST00000456830 416 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.85□□□□□ -2.27
SPENQ96T58 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.85□□□□□ -2.27
SPENQ96T58 AC008676.3-201ENST00000521237 435 ntBASIC0.85□□□□□ -2.27
SPENQ96T58 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.85□□□□□ -2.27
SPENQ96T58 Y_RNA.412-201ENST00000384001 104 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 MIR150-201ENST00000385048 84 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 PGBD4P3-201ENST00000440731 581 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 AL500527.1-201ENST00000448532 255 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 COX6CP18-201ENST00000448769 222 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 BZW1P2-201ENST00000473537 826 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.84□□□□□ -2.27
SPENQ96T58 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.84□□□□□ -2.27
SPENQ96T58 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.84□□□□□ -2.27
SPENQ96T58 AL132857.1-201ENST00000555180 708 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 MIR203B-201ENST00000636080 86 ntBASIC0.84□□□□□ -2.27
SPENQ96T58 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SPENQ96T58 SNORA62.1-201ENST00000364287 154 ntBASIC0.84□□□□□ -2.28
SPENQ96T58 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.84□□□□□ -2.28
SPENQ96T58 CST2P1-201ENST00000425770 87 ntBASIC0.84□□□□□ -2.28
SPENQ96T58 GDI2P2-201ENST00000445131 608 ntBASIC0.84□□□□□ -2.28
SPENQ96T58 AC239860.2-201ENST00000525886 270 ntBASIC0.84□□□□□ -2.28
SPENQ96T58 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms