Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AL133271.1-201ENST00000538229 291 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AC243972.3-201ENST00000539655 198 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AL133153.1-201ENST00000557756 303 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AC090877.1-201ENST00000561418 344 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AC064836.2-201ENST00000609491 462 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AC093838.1-201ENST00000613014 469 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 AL603758.1-201ENST00000618654 241 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 FP236240.3-201ENST00000623061 327 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 FRG1KP-201ENST00000623592 341 ntBASIC3.98□□□□□ -1.77
HAPLN3Q96S86 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HAPLN3Q96S86 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC007685.1-201ENST00000329806 452 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 RNU5E-8P-201ENST00000363502 116 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 Y_RNA.394-201ENST00000383942 103 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AL583834.1-201ENST00000406943 343 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 RNA5SP239-201ENST00000410218 129 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC099677.1-201ENST00000420575 175 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC017083.1-201ENST00000428093 483 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 SRIP2-201ENST00000428470 166 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC006946.1-201ENST00000429106 328 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC079781.2-201ENST00000446424 169 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC234775.1-201ENST00000454247 670 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 RNU7-63P-201ENST00000459054 62 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC078785.3-201ENST00000476607 425 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AL163973.1-201ENST00000484753 577 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 SNORD60.2-201ENST00000516883 86 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 RNU6-410P-201ENST00000517006 107 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC107953.1-201ENST00000522216 297 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 DEFB109D-201ENST00000529497 240 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC105224.1-201ENST00000587055 421 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC012669.1-201ENST00000603209 283 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AL121992.2-201ENST00000606262 256 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 MIR6130-201ENST00000619419 109 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 AC090617.10-201ENST00000624308 134 ntBASIC3.97□□□□□ -1.77
HAPLN3Q96S86 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.97□□□□□ -1.77
HAPLN3Q96S86 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.77
HAPLN3Q96S86 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HAPLN3Q96S86 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HAPLN3Q96S86 MAPK10-372ENST00000641954 3413 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HAPLN3Q96S86 NACAP2-201ENST00000318548 624 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 Y_RNA.58-201ENST00000362807 102 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNU6-1155P-201ENST00000363554 107 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 Y_RNA.154-201ENST00000363624 102 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 U3.11-201ENST00000364476 212 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNY3P1-201ENST00000365085 102 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNY3-201ENST00000365484 102 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 Y_RNA.367-201ENST00000365544 101 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNU6-432P-201ENST00000384196 109 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 Y_RNA.490-201ENST00000384413 102 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNU6-606P-201ENST00000384721 111 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 MIR30B-201ENST00000384850 88 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 MIR124-3-201ENST00000384866 87 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HAPLN3Q96S86 HLFP1-201ENST00000402375 499 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 MTCYBP8-201ENST00000422855 651 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 MTCO3P46-201ENST00000425787 232 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.96□□□□□ -1.78
HAPLN3Q96S86 OR4K11P-201ENST00000431829 904 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RPS20P5-201ENST00000434808 360 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 MRPL50P4-201ENST00000446432 475 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AL500522.2-201ENST00000448562 343 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AC073415.1-201ENST00000449240 153 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 SNORD108-201ENST00000459332 71 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AL049714.1-201ENST00000466686 347 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AC006512.1-201ENST00000468816 291 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 HMGN1P10-201ENST00000474557 553 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AC084198.1-201ENST00000477747 402 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AC135721.1-201ENST00000497954 479 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNU6-277P-201ENST00000516272 106 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 SNORD27.1-201ENST00000516319 72 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNU7-30P-201ENST00000516835 62 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 RNU6-352P-201ENST00000516908 107 ntBASIC3.96□□□□□ -1.78
HAPLN3Q96S86 AC105029.1-201ENST00000520250 669 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms