Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC025588.4-201ENST00000615802 908 ntBASIC1.62□□□□□ -2.15
PCDH15Q96QU1 MTND5P11-201ENST00000511037 1812 ntBASIC1.62□□□□□ -2.15
PCDH15Q96QU1 DBF4P1-201ENST00000412976 1892 ntBASIC1.62□□□□□ -2.15
PCDH15Q96QU1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC024082.2-201ENST00000434771 238 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 MTND4LP10-201ENST00000435146 291 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL121871.1-201ENST00000443413 436 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 RFC5P1-201ENST00000454419 874 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 RNA5SP490-201ENST00000517141 136 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC087272.1-201ENST00000523624 533 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC025588.3-201ENST00000604182 274 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 MFSD8-213ENST00000641134 1327 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 RNU6-883P-201ENST00000384597 107 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 SNORA1.3-201ENST00000384676 136 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 RNU2-47P-201ENST00000410649 186 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 RPL7P37-201ENST00000425095 738 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 MTCYBP45-201ENST00000435243 565 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC092798.1-201ENST00000458542 409 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC055855.1-201ENST00000489563 579 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC022447.3-201ENST00000506865 495 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC109471.1-201ENST00000511631 612 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 RNU6-488P-201ENST00000515918 99 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AL138976.2-201ENST00000563989 694 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC105224.1-201ENST00000587055 421 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AP003973.1-201ENST00000604639 691 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 MIR6840-201ENST00000611937 71 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC095031.1-201ENST00000623685 672 ntBASIC1.61□□□□□ -2.15
PCDH15Q96QU1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
PCDH15Q96QU1 ZNF876P-202ENST00000398732 1485 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 SNORA6-201ENST00000384033 151 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AL121978.1-201ENST00000402778 359 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC073264.1-201ENST00000411508 416 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 BX664727.1-201ENST00000416024 466 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 CR848007.2-201ENST00000424918 787 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 BX248409.1-201ENST00000455497 255 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 RPL23AP55-201ENST00000498163 452 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 SNORA70.16-201ENST00000516390 95 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 RN7SKP40-201ENST00000517211 242 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AP001804.3-201ENST00000525146 880 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC087441.2-201ENST00000529141 262 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 MIR4504-201ENST00000577413 92 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC010928.2-201ENST00000588017 287 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC100814.1-201ENST00000606963 623 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 RMST_6.1-201ENST00000611980 203 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC006213.4-201ENST00000616184 634 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AC006213.5-201ENST00000619673 288 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AL360181.4-201ENST00000621752 134 ntBASIC1.6□□□□□ -2.15
PCDH15Q96QU1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PCDH15Q96QU1 AL391987.6-201ENST00000305671 199 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 RNU6-53P-201ENST00000365367 106 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 RNU6-1027P-201ENST00000383998 107 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AL357078.2-201ENST00000416486 427 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AL606495.1-201ENST00000422100 813 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AL137159.1-201ENST00000452808 512 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 RNU6-1282P-201ENST00000516735 96 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC007375.1-201ENST00000554513 578 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AC008739.2-201ENST00000597006 317 ntBASIC1.59□□□□□ -2.15
PCDH15Q96QU1 AP001330.4-201ENST00000604350 154 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms