Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC005592.1-201ENST00000566527 1640 ntBASIC4.4□□□□□ -1.7
PTCHD1Q96NR3 AL158163.1-201ENST00000603915 1649 ntBASIC4.4□□□□□ -1.7
PTCHD1Q96NR3 AL672167.1-203ENST00000641299 2975 ntBASIC4.4□□□□□ -1.7
PTCHD1Q96NR3 OR51H2P-202ENST00000641424 3046 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 RN7SKP115-201ENST00000363177 317 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 RNU6-1059P-201ENST00000363752 98 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 Z98745.1-201ENST00000402553 494 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AP000580.1-201ENST00000404439 358 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC119751.6-201ENST00000416712 186 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC093151.1-201ENST00000427711 313 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 RPL23AP50-201ENST00000434149 455 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 HMGB3P30-201ENST00000457863 606 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 RN7SL354P-201ENST00000469282 294 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC020890.1-201ENST00000491837 504 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC116655.1-201ENST00000508324 901 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 RNU6-914P-201ENST00000516749 109 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 RNU6-264P-201ENST00000517134 104 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 GNAI2P1-201ENST00000541815 315 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC091516.1-201ENST00000549191 703 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AL121603.1-201ENST00000553815 142 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC113195.1-201ENST00000579952 141 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC005899.2-201ENST00000584353 90 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC104695.3-201ENST00000604052 296 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 ELOCP5-201ENST00000604924 333 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC010680.4-201ENST00000605334 543 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 MIR6820-201ENST00000611508 62 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC099669.2-201ENST00000616549 437 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 MIR8069-1-201ENST00000616627 86 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 MIR8069-2-201ENST00000621412 86 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC067931.1-201ENST00000624190 671 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC006971.1-201ENST00000407916 4486 ntBASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
PTCHD1Q96NR3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AC079741.1-201ENST00000321498 212 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 MIR192-201ENST00000384915 110 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 Y_RNA.645-201ENST00000391229 102 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AL592291.1-201ENST00000403830 352 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AC243428.1-201ENST00000421099 264 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 MTATP6P4-201ENST00000427725 675 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 HMGB1P12-201ENST00000438594 598 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 RPL26P6-201ENST00000440913 438 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AL359073.1-201ENST00000448036 403 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 RNU7-187P-201ENST00000458985 68 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AC017037.1-201ENST00000508460 471 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 RNU6-794P-201ENST00000517261 64 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 SNRPGP16-201ENST00000533275 226 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AC092447.9-201ENST00000603395 144 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 PRR13P7-201ENST00000605538 430 ntBASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTCHD1Q96NR3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC126323.6-202ENST00000568092 3511 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 AC007390.2-201ENST00000606229 3803 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 ZNF285B-201ENST00000561698 1767 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 Y_RNA.153-201ENST00000363615 91 ntBASIC4.38□□□□□ -1.71
PTCHD1Q96NR3 SNORA71.2-201ENST00000364941 134 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms