Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AL133547.1-201ENST00000448546 220 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AL356010.1-201ENST00000456364 102 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 ELOCP24-201ENST00000456370 334 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 RPL7L1P8-201ENST00000469911 741 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC092451.1-201ENST00000480211 153 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC068305.1-201ENST00000497406 726 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC021146.1-201ENST00000511202 716 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 RNU6-352P-201ENST00000516908 107 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 RN7SKP96-201ENST00000516948 297 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC009902.1-201ENST00000519351 183 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AP001804.3-201ENST00000525146 880 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC090502.2-201ENST00000549267 280 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC024220.1-201ENST00000603675 484 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC011468.4-201ENST00000603942 409 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 AC083806.3-201ENST00000614016 455 ntBASIC4.2□□□□□ -1.74
CHFRQ96EP1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHFRQ96EP1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CHFRQ96EP1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CHFRQ96EP1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHFRQ96EP1 AL049780.3-201ENST00000624612 1583 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHFRQ96EP1 ZNF807-201ENST00000328088 1707 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 MIR448-201ENST00000362131 111 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 RNU6-522P-201ENST00000364497 107 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 Y_RNA.574-201ENST00000384766 95 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 RNU6-952P-201ENST00000391164 108 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 RNU2-64P-201ENST00000411315 191 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 RAB9AP3-201ENST00000412737 573 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 MCFD2P1-201ENST00000417812 300 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC104058.1-201ENST00000448028 297 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 RAB9AP1-201ENST00000449393 573 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 RNU7-66P-201ENST00000459469 62 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC104564.1-201ENST00000493028 407 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC025445.1-201ENST00000502728 300 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC091885.1-201ENST00000506658 268 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 MRPS35P2-201ENST00000508242 191 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 MTCYBP40-201ENST00000509390 1135 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC098591.2-201ENST00000510152 315 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 PPBPP1-201ENST00000510807 373 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 SNORA70.14-201ENST00000516205 110 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 RNU6-864P-201ENST00000516256 108 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 RNU6-1088P-201ENST00000516850 104 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 RN7SKP277-201ENST00000516895 283 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC069240.1-201ENST00000548774 375 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 MIR4644-201ENST00000579929 84 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 MIR5684-201ENST00000585074 65 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 MIR3942-201ENST00000585264 109 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC015813.4-201ENST00000610469 179 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 MIR6868-201ENST00000611215 58 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CHFRQ96EP1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHFRQ96EP1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHFRQ96EP1 AC032011.1-201ENST00000611703 1549 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 MTND5P19-201ENST00000424872 1794 ntBASIC4.19□□□□□ -1.74
CHFRQ96EP1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHFRQ96EP1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHFRQ96EP1 MAPK10-372ENST00000641954 3413 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC105074.1-201ENST00000623380 3095 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC119744.1-201ENST00000454746 1715 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 AC068254.2-201ENST00000623938 3577 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHFRQ96EP1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHFRQ96EP1 RNU6-1188P-201ENST00000363795 107 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 RNA5SP189-201ENST00000364920 115 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 RNU6-1062P-201ENST00000383908 107 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.18□□□□□ -1.74
CHFRQ96EP1 RNU4-26P-201ENST00000410270 107 ntBASIC4.18□□□□□ -1.74
CHFRQ96EP1 RN7SKP158-201ENST00000410453 326 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms